Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.64□□□□□ -1.67
EPHB3P54753 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.64□□□□□ -1.67
EPHB3P54753 BNIP3P5-201ENST00000562290 498 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 MIR3160-1-201ENST00000577972 85 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 RN7SL176P-201ENST00000580352 264 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 COX6CP3-201ENST00000580869 223 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.64□□□□□ -1.67
EPHB3P54753 AC062037.2-201ENST00000610137 73 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AC006157.1-201ENST00000611750 366 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 MIR6891-201ENST00000618788 93 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AC103705.1-201ENST00000619013 241 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AL023881.1-201ENST00000621088 301 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EPHB3P54753 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.64□□□□□ -1.67
EPHB3P54753 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
EPHB3P54753 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
EPHB3P54753 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
EPHB3P54753 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
EPHB3P54753 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
EPHB3P54753 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
EPHB3P54753 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.63□□□□□ -1.67
EPHB3P54753 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 AC000374.1-201ENST00000434698 1745 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.63□□□□□ -1.67
EPHB3P54753 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
EPHB3P54753 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.63□□□□□ -1.67
EPHB3P54753 MIR383-201ENST00000362257 73 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 Y_RNA.489-201ENST00000384410 101 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.63□□□□□ -1.67
EPHB3P54753 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.63□□□□□ -1.67
EPHB3P54753 PDSS1P1-201ENST00000422953 1114 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.63□□□□□ -1.67
EPHB3P54753 OR2AH1P-201ENST00000425717 928 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.63□□□□□ -1.67
EPHB3P54753 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.63□□□□□ -1.67
EPHB3P54753 RPS26P2-201ENST00000440331 348 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AC104073.1-201ENST00000451988 151 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.63□□□□□ -1.67
EPHB3P54753 RPL30P11-201ENST00000495304 339 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AC116655.1-201ENST00000508324 901 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AC008526.1-201ENST00000509149 338 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AC087854.1-201ENST00000519706 414 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC135001.1-201ENST00000544546 283 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC018889.1-201ENST00000605372 397 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AC011890.2-201ENST00000613393 294 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AL138726.1-201ENST00000614873 333 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC010378.1-201ENST00000619270 362 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AL357559.1-201ENST00000622228 274 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 AC091905.2-201ENST00000623143 306 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 U6.114-201ENST00000636407 96 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
EPHB3P54753 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.63□□□□□ -1.67
EPHB3P54753 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EPHB3P54753 AC027290.2-201ENST00000623210 18662 ntBASIC4.63□□□□□ -1.67
EPHB3P54753 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 AL158163.1-201ENST00000603915 1649 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 RNU6-99P-201ENST00000364721 107 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 SNORD115-7-201ENST00000365306 82 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.62□□□□□ -1.67
EPHB3P54753 Y_RNA.496-201ENST00000384444 101 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
EPHB3P54753 Y_RNA.645-201ENST00000391229 102 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 SNORA75.6-201ENST00000391318 127 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 AL391417.1-201ENST00000404100 426 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 RNU2-64P-201ENST00000411315 191 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 RPS20P14-201ENST00000412545 360 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.62□□□□□ -1.67
EPHB3P54753 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.62□□□□□ -1.67
EPHB3P54753 DPH3P2-201ENST00000422618 250 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 AC008267.5-201ENST00000424928 265 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.62□□□□□ -1.67
EPHB3P54753 SNAP23P1-201ENST00000433229 246 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 RPL7P28-201ENST00000437739 740 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 RPL23AP89-201ENST00000439324 255 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms