Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC005183.1-201ENST00000603687 1979 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 SMG1P4-204ENST00000523028 4131 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC021146.4-201ENST00000309229 279 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 RNU6-395P-201ENST00000365662 106 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 MIR449B-201ENST00000384995 97 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 RNU6ATAC-201ENST00000408749 126 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 YME1L1P1-201ENST00000429435 297 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 HSPD1P21-201ENST00000436541 245 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AL137792.2-201ENST00000443484 235 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 snoU13.4-201ENST00000458916 104 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 RPS17P2-201ENST00000461663 408 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 RN7SL558P-201ENST00000497468 299 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 SCARNA15.2-201ENST00000516409 127 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 RNA5SP291-201ENST00000517222 105 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC063950.1-201ENST00000552036 308 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC006272.2-201ENST00000594725 163 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC002044.1-201ENST00000606707 158 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AL031601.2-202ENST00000622650 282 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 LINC01109-201ENST00000603837 3081 ntBASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.49□□□□□ -1.53
TMEM88BA6NKF7 AC032011.1-201ENST00000611703 1549 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC125257.1-201ENST00000560400 2930 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AP001273.1-201ENST00000624493 3152 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 SNORA9-201ENST00000384215 133 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 Y_RNA.459-201ENST00000384251 102 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 RNU6-1050P-201ENST00000410388 107 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 Y_RNA.646-201ENST00000410980 101 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 RPL12P18-201ENST00000437175 325 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 RPS24P6-201ENST00000452670 400 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC087884.1-201ENST00000469738 328 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 RNU6-1315P-201ENST00000517187 99 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC005899.2-201ENST00000584353 90 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC018462.2-201ENST00000605375 395 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AP000654.2-201ENST00000605633 586 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC011890.2-201ENST00000613393 294 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC083806.3-201ENST00000614016 455 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 PLCE1P1-201ENST00000622094 305 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 Z99571.1-201ENST00000636677 394 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 ZFRP1-201ENST00000457579 2970 ntBASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.48□□□□□ -1.53
TMEM88BA6NKF7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 EOGT-210ENST00000615922 1931 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 RN7SKP185-201ENST00000362813 326 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 RNU6-1167P-201ENST00000363227 94 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 RNU1-132P-201ENST00000364300 164 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 RNA5SP513-201ENST00000364648 118 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 MIR659-201ENST00000384963 97 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 RNU6-1106P-201ENST00000390845 107 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 RPL7P37-201ENST00000425095 738 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 AL592045.1-201ENST00000429867 352 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 GPM6BP2-201ENST00000432046 144 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 GPM6BP1-201ENST00000446387 144 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 AC245028.2-201ENST00000458673 253 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 RPS20P22-201ENST00000473700 357 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 AC146944.2-203ENST00000502493 354 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 AC021146.3-201ENST00000511911 260 ntBASIC5.47□□□□□ -1.53
TMEM88BA6NKF7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms