Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.72■□□□□ 0.27
CDH20Q9HBT6 AL355355.2-201ENST00000442321 338 ntBASIC16.72■□□□□ 0.27
CDH20Q9HBT6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 AC004980.1-204ENST00000429707 299 ntBASIC16.71■□□□□ 0.27
CDH20Q9HBT6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 AC026271.3-201ENST00000571884 352 ntBASIC16.71■□□□□ 0.27
CDH20Q9HBT6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH20Q9HBT6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 SNORA78-201ENST00000459373 127 ntBASIC16.7■□□□□ 0.26
CDH20Q9HBT6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 MIR4785-201ENST00000585005 73 ntBASIC16.7■□□□□ 0.26
CDH20Q9HBT6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH20Q9HBT6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 AC026471.5-201ENST00000615068 467 ntBASIC16.69■□□□□ 0.26
CDH20Q9HBT6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms