Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3TC1Q8TE82 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.85■■□□□ 1.41
SH3TC1Q8TE82 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3TC1Q8TE82 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.85■■□□□ 1.41
SH3TC1Q8TE82 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3TC1Q8TE82 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 CR769767.2-201ENST00000622735 460 ntBASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 AC005332.1-201ENST00000577698 1310 ntBASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 STARP1-201ENST00000397973 869 ntBASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3TC1Q8TE82 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.83■■□□□ 1.41
SH3TC1Q8TE82 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SH3TC1Q8TE82 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.83■■□□□ 1.41
SH3TC1Q8TE82 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3TC1Q8TE82 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3TC1Q8TE82 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3TC1Q8TE82 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SH3TC1Q8TE82 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 AC112907.2-201ENST00000448639 330 ntBASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 AC116407.4-201ENST00000623319 1061 ntBASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
SH3TC1Q8TE82 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 AC083849.1-201ENST00000615227 514 ntBASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3TC1Q8TE82 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 HYMAI.1-201ENST00000620949 238 ntBASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SH3TC1Q8TE82 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 SPDYE15P-201ENST00000424157 909 ntBASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms