Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.32■■□□□ 1
Rfc3Q8R323 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc3Q8R323 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rfc3Q8R323 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc3Q8R323 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc3Q8R323 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rfc3Q8R323 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc3Q8R323 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc3Q8R323 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfc3Q8R323 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc3Q8R323 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Rfc3Q8R323 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc3Q8R323 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.27■■□□□ 1
Rfc3Q8R323 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rfc3Q8R323 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rfc3Q8R323 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
Rfc3Q8R323 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfc3Q8R323 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfc3Q8R323 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rfc3Q8R323 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfc3Q8R323 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfc3Q8R323 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfc3Q8R323 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rfc3Q8R323 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rfc3Q8R323 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfc3Q8R323 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.2■□□□□ 0.98
Rfc3Q8R323 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
Rfc3Q8R323 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Mir6538-201ENSMUST00000183713 110 ntBASIC21.18■□□□□ 0.98
Rfc3Q8R323 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Gm4799-201ENSMUST00000095396 657 ntBASIC21.17■□□□□ 0.98
Rfc3Q8R323 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc3Q8R323 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc3Q8R323 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc3Q8R323 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Gm37136-201ENSMUST00000194368 194 ntBASIC21.13■□□□□ 0.97
Rfc3Q8R323 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc3Q8R323 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.12■□□□□ 0.97
Rfc3Q8R323 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.12■□□□□ 0.97
Rfc3Q8R323 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rfc3Q8R323 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc3Q8R323 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc3Q8R323 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc3Q8R323 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc3Q8R323 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc3Q8R323 Scarna2-201ENSMUST00000157560 414 ntBASIC21.1■□□□□ 0.97
Rfc3Q8R323 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rfc3Q8R323 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc3Q8R323 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfc3Q8R323 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rfc3Q8R323 Mir3960-201ENSMUST00000198213 73 ntBASIC21.07■□□□□ 0.96
Rfc3Q8R323 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc3Q8R323 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc3Q8R323 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms