Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lin54Q571G4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lin54Q571G4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Lin54Q571G4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lin54Q571G4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.96■□□□□ 0.79
Lin54Q571G4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lin54Q571G4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lin54Q571G4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lin54Q571G4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lin54Q571G4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Lin54Q571G4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lin54Q571G4 Gm24804-201ENSMUST00000174982 85 ntBASIC19.95■□□□□ 0.78
Lin54Q571G4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lin54Q571G4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Lin54Q571G4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lin54Q571G4 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.94■□□□□ 0.78
Lin54Q571G4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lin54Q571G4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lin54Q571G4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lin54Q571G4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Lin54Q571G4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lin54Q571G4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lin54Q571G4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lin54Q571G4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin54Q571G4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin54Q571G4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin54Q571G4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lin54Q571G4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lin54Q571G4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lin54Q571G4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lin54Q571G4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.91■□□□□ 0.78
Lin54Q571G4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lin54Q571G4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lin54Q571G4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lin54Q571G4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lin54Q571G4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lin54Q571G4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lin54Q571G4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lin54Q571G4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lin54Q571G4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.89■□□□□ 0.77
Lin54Q571G4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lin54Q571G4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.89■□□□□ 0.77
Lin54Q571G4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lin54Q571G4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin54Q571G4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lin54Q571G4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin54Q571G4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin54Q571G4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Lin54Q571G4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin54Q571G4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lin54Q571G4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.87■□□□□ 0.77
Lin54Q571G4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lin54Q571G4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.87■□□□□ 0.77
Lin54Q571G4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lin54Q571G4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lin54Q571G4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lin54Q571G4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Lin54Q571G4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin54Q571G4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin54Q571G4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lin54Q571G4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.86■□□□□ 0.77
Lin54Q571G4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin54Q571G4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin54Q571G4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin54Q571G4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin54Q571G4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lin54Q571G4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lin54Q571G4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lin54Q571G4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Lin54Q571G4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lin54Q571G4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lin54Q571G4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Lin54Q571G4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Lin54Q571G4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lin54Q571G4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lin54Q571G4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lin54Q571G4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lin54Q571G4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lin54Q571G4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lin54Q571G4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lin54Q571G4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lin54Q571G4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lin54Q571G4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lin54Q571G4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lin54Q571G4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lin54Q571G4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lin54Q571G4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lin54Q571G4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lin54Q571G4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Lin54Q571G4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lin54Q571G4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lin54Q571G4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lin54Q571G4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.78■□□□□ 0.76
Lin54Q571G4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lin54Q571G4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Lin54Q571G4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lin54Q571G4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lin54Q571G4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lin54Q571G4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lin54Q571G4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms