Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 AIM3YBR108W 2844 nt8.06□□□□□ -1.12
TY4A-JP47023 ERO1YML130C 1692 nt8.05□□□□□ -1.12
TY4A-JP47023 EMC3YKL207W 762 nt8.05□□□□□ -1.12
TY4A-JP47023 YBL095WYBL095W 813 nt8.05□□□□□ -1.12
TY4A-JP47023 PFS2YNL317W 1398 nt8.05□□□□□ -1.12
TY4A-JP47023 FET4YMR319C 1659 nt8.03□□□□□ -1.12
TY4A-JP47023 YMR210WYMR210W 1350 nt8.03□□□□□ -1.12
TY4A-JP47023 YGR210CYGR210C 1236 nt8.03□□□□□ -1.12
TY4A-JP47023 YLR280CYLR280C 351 nt8.03□□□□□ -1.12
TY4A-JP47023 SRM1YGL097W 1449 nt8.03□□□□□ -1.12
TY4A-JP47023 SNU71YGR013W 1863 nt8.02□□□□□ -1.12
TY4A-JP47023 KGD2YDR148C 1392 nt8.02□□□□□ -1.13
TY4A-JP47023 MAK32YCR019W 1092 nt8.02□□□□□ -1.13
TY4A-JP47023 YFR020WYFR020W 699 nt8.02□□□□□ -1.13
TY4A-JP47023 FZF1YGL254W 900 nt8.02□□□□□ -1.13
TY4A-JP47023 YJL211CYJL211C 444 nt8.02□□□□□ -1.13
TY4A-JP47023 GDA1YEL042W 1557 nt8.01□□□□□ -1.13
TY4A-JP47023 TGA1tA(UGC)A 73 nt8.01□□□□□ -1.13
TY4A-JP47023 tA(UGC)EtA(UGC)E 73 nt8.01□□□□□ -1.13
TY4A-JP47023 tA(UGC)GtA(UGC)G 73 nt8.01□□□□□ -1.13
TY4A-JP47023 tA(UGC)LtA(UGC)L 73 nt8.01□□□□□ -1.13
TY4A-JP47023 tA(UGC)OtA(UGC)O 73 nt8.01□□□□□ -1.13
TY4A-JP47023 GPM1YKL152C 744 nt8.01□□□□□ -1.13
TY4A-JP47023 NSE5YML023C 1671 nt8.01□□□□□ -1.13
TY4A-JP47023 DAL4YIR028W 1908 nt8□□□□□ -1.13
TY4A-JP47023 HMT1YBR034C 1047 nt8□□□□□ -1.13
TY4A-JP47023 YPL108WYPL108W 507 nt8□□□□□ -1.13
TY4A-JP47023 ATF1YOR377W 1578 nt8□□□□□ -1.13
TY4A-JP47023 AAT1YKL106W 1356 nt7.99□□□□□ -1.13
TY4A-JP47023 RRP46YGR095C 672 nt7.99□□□□□ -1.13
TY4A-JP47023 PAM17YKR065C 594 nt7.99□□□□□ -1.13
TY4A-JP47023 YPT11YNL304W 1254 nt7.99□□□□□ -1.13
TY4A-JP47023 CTF3YLR381W 2202 nt7.99□□□□□ -1.13
TY4A-JP47023 SLM3YDL033C 1254 nt7.98□□□□□ -1.13
TY4A-JP47023 YJL160CYJL160C 864 nt7.98□□□□□ -1.13
TY4A-JP47023 MSB3YNL293W 1902 nt7.97□□□□□ -1.13
TY4A-JP47023 MPA43YNL249C 1629 nt7.97□□□□□ -1.13
TY4A-JP47023 RCR1YBR005W 642 nt7.97□□□□□ -1.13
TY4A-JP47023 LAS17YOR181W 1902 nt7.97□□□□□ -1.13
TY4A-JP47023 YLR072WYLR072W 2082 nt7.96□□□□□ -1.13
TY4A-JP47023 MDH2YOL126C 1134 nt7.96□□□□□ -1.14
TY4A-JP47023 YMC2YBR104W 990 nt7.96□□□□□ -1.14
TY4A-JP47023 HSV2YGR223C 1347 nt7.96□□□□□ -1.14
TY4A-JP47023 EEB1YPL095C 1371 nt7.96□□□□□ -1.14
TY4A-JP47023 HSM3YBR272C 1443 nt7.95□□□□□ -1.14
TY4A-JP47023 GGC1YDL198C 903 nt7.95□□□□□ -1.14
TY4A-JP47023 SWP1YMR149W 861 nt7.95□□□□□ -1.14
TY4A-JP47023 TOS2YGR221C 1869 nt7.95□□□□□ -1.14
TY4A-JP47023 YFR006WYFR006W 1608 nt7.95□□□□□ -1.14
TY4A-JP47023 YPL277CYPL277C 1464 nt7.94□□□□□ -1.14
TY4A-JP47023 BUD20YLR074C 501 nt7.94□□□□□ -1.14
TY4A-JP47023 YIL108WYIL108W 2091 nt7.93□□□□□ -1.14
TY4A-JP47023 GAS1YMR307W 1680 nt7.93□□□□□ -1.14
TY4A-JP47023 SBP1YHL034C 885 nt7.93□□□□□ -1.14
TY4A-JP47023 GYP8YFL027C 1494 nt7.92□□□□□ -1.14
TY4A-JP47023 MKK1YOR231W 1527 nt7.92□□□□□ -1.14
TY4A-JP47023 BUD9YGR041W 1644 nt7.92□□□□□ -1.14
TY4A-JP47023 AIM34YMR003W 597 nt7.91□□□□□ -1.14
TY4A-JP47023 YMR316C-BYMR316C-B 309 nt7.91□□□□□ -1.14
TY4A-JP47023 YOR343CYOR343C 327 nt7.91□□□□□ -1.14
TY4A-JP47023 FCY1YPR062W 477 nt7.91□□□□□ -1.14
TY4A-JP47023 PTC6YCR079W 1329 nt7.91□□□□□ -1.14
TY4A-JP47023 CHS5YLR330W 2016 nt7.91□□□□□ -1.14
TY4A-JP47023 YMR166CYMR166C 1107 nt7.9□□□□□ -1.14
TY4A-JP47023 LEA1YPL213W 717 nt7.9□□□□□ -1.14
TY4A-JP47023 PET18YCR020C 648 nt7.89□□□□□ -1.15
TY4A-JP47023 ITR1YDR497C 1755 nt7.89□□□□□ -1.15
TY4A-JP47023 SPS22YCL048W 1392 nt7.88□□□□□ -1.15
TY4A-JP47023 THI3YDL080C 1830 nt7.88□□□□□ -1.15
TY4A-JP47023 YBL070CYBL070C 321 nt7.88□□□□□ -1.15
TY4A-JP47023 GGA2YHR108W 1758 nt7.87□□□□□ -1.15
TY4A-JP47023 AGP2YBR132C 1791 nt7.87□□□□□ -1.15
TY4A-JP47023 GRH1YDR517W 1119 nt7.87□□□□□ -1.15
TY4A-JP47023 HMS2YJR147W 1077 nt7.87□□□□□ -1.15
TY4A-JP47023 RSM7YJR113C 744 nt7.86□□□□□ -1.15
TY4A-JP47023 MRS4YKR052C 915 nt7.86□□□□□ -1.15
TY4A-JP47023 PMT7YDR307W 1989 nt7.86□□□□□ -1.15
TY4A-JP47023 HXT13YEL069C 1695 nt7.86□□□□□ -1.15
TY4A-JP47023 SGE1YPR198W 1632 nt7.85□□□□□ -1.15
TY4A-JP47023 GAA1YLR088W 1845 nt7.85□□□□□ -1.15
TY4A-JP47023 YER156CYER156C 1017 nt7.85□□□□□ -1.15
TY4A-JP47023 YFL052WYFL052W 1398 nt7.84□□□□□ -1.15
TY4A-JP47023 COX16YJL003W 357 nt7.84□□□□□ -1.15
TY4A-JP47023 HRA1HRA1 564 nt7.84□□□□□ -1.15
TY4A-JP47023 LSP1YPL004C 1026 nt7.84□□□□□ -1.15
TY4A-JP47023 MAS2YHR024C 1449 nt7.84□□□□□ -1.15
TY4A-JP47023 AFG2YLR397C 2343 nt7.84□□□□□ -1.15
TY4A-JP47023 RNA170RNA170 169 nt7.83□□□□□ -1.16
TY4A-JP47023 CMR1YDL156W 1569 nt7.83□□□□□ -1.16
TY4A-JP47023 MRP1YDR347W 966 nt7.82□□□□□ -1.16
TY4A-JP47023 RPL12BYDR418W 498 nt7.82□□□□□ -1.16
TY4A-JP47023 RRT14YIL127C 621 nt7.82□□□□□ -1.16
TY4A-JP47023 PRC1YMR297W 1599 nt7.82□□□□□ -1.16
TY4A-JP47023 MET22YOL064C 1074 nt7.82□□□□□ -1.16
TY4A-JP47023 ADA2YDR448W 1305 nt7.81□□□□□ -1.16
TY4A-JP47023 TOP3YLR234W 1971 nt7.81□□□□□ -1.16
TY4A-JP47023 OCH1YGL038C 1443 nt7.81□□□□□ -1.16
TY4A-JP47023 JIP4YDR475C 2631 nt7.81□□□□□ -1.16
TY4A-JP47023 YEL034C-AYEL034C-A 603 nt7.81□□□□□ -1.16
TY4A-JP47023 CAK1YFL029C 1107 nt7.81□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms