Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 RPL12BYDR418W 498 nt8.23□□□□□ -1.09
DEF1P35732 ARA2YMR041C 1008 nt8.23□□□□□ -1.09
DEF1P35732 LEU2YCL018W 1095 nt8.23□□□□□ -1.09
DEF1P35732 PHB2YGR231C 933 nt8.22□□□□□ -1.09
DEF1P35732 FLX1YIL134W 936 nt8.22□□□□□ -1.09
DEF1P35732 YMR265CYMR265C 1386 nt8.22□□□□□ -1.09
DEF1P35732 VBA3YCL069W 1377 nt8.21□□□□□ -1.1
DEF1P35732 ADH3YMR083W 1128 nt8.2□□□□□ -1.1
DEF1P35732 SNX3YOR357C 489 nt8.2□□□□□ -1.1
DEF1P35732 HAP5YOR358W 729 nt8.2□□□□□ -1.1
DEF1P35732 TPO1YLL028W 1761 nt8.2□□□□□ -1.1
DEF1P35732 WSC4YHL028W 1818 nt8.19□□□□□ -1.1
DEF1P35732 YCR025CYCR025C 411 nt8.19□□□□□ -1.1
DEF1P35732 HGH1YGR187C 1185 nt8.19□□□□□ -1.1
DEF1P35732 snR31snR31 225 nt8.19□□□□□ -1.1
DEF1P35732 NAM8YHR086W 1572 nt8.18□□□□□ -1.1
DEF1P35732 CLN1YMR199W 1641 nt8.18□□□□□ -1.1
DEF1P35732 TKL2YBR117C 2046 nt8.17□□□□□ -1.1
DEF1P35732 YCP4YCR004C 744 nt8.17□□□□□ -1.1
DEF1P35732 BUR6YER159C 429 nt8.17□□□□□ -1.1
DEF1P35732 RPN14YGL004C 1254 nt8.17□□□□□ -1.1
DEF1P35732 YKR018CYKR018C 2178 nt8.17□□□□□ -1.1
DEF1P35732 RSP5YER125W 2430 nt8.16□□□□□ -1.1
DEF1P35732 GYP8YFL027C 1494 nt8.16□□□□□ -1.1
DEF1P35732 YBR284WYBR284W 2394 nt8.15□□□□□ -1.1
DEF1P35732 SLX5YDL013W 1860 nt8.15□□□□□ -1.1
DEF1P35732 NOG2YNR053C 1461 nt8.15□□□□□ -1.1
DEF1P35732 FET4YMR319C 1659 nt8.14□□□□□ -1.11
DEF1P35732 SDS24YBR214W 1584 nt8.14□□□□□ -1.11
DEF1P35732 NMT1YLR195C 1368 nt8.14□□□□□ -1.11
DEF1P35732 TOS1YBR162C 1368 nt8.14□□□□□ -1.11
DEF1P35732 YKR012CYKR012C 378 nt8.14□□□□□ -1.11
DEF1P35732 CRC1YOR100C 984 nt8.14□□□□□ -1.11
DEF1P35732 SWM1YDR260C 513 nt8.13□□□□□ -1.11
DEF1P35732 MOB1YIL106W 945 nt8.13□□□□□ -1.11
DEF1P35732 YKL053WYKL053W 375 nt8.13□□□□□ -1.11
DEF1P35732 REX2YLR059C 810 nt8.13□□□□□ -1.11
DEF1P35732 Q0010Q0010 387 nt8.13□□□□□ -1.11
DEF1P35732 HXT2YMR011W 1626 nt8.13□□□□□ -1.11
DEF1P35732 SRF1YDL133W 1314 nt8.12□□□□□ -1.11
DEF1P35732 CYC3YAL039C 810 nt8.12□□□□□ -1.11
DEF1P35732 YLR122CYLR122C 378 nt8.12□□□□□ -1.11
DEF1P35732 SRP54YPR088C 1626 nt8.11□□□□□ -1.11
DEF1P35732 SAN1YDR143C 1833 nt8.1□□□□□ -1.11
DEF1P35732 LYS20YDL182W 1287 nt8.1□□□□□ -1.11
DEF1P35732 YNR001W-AYNR001W-A 219 nt8.1□□□□□ -1.11
DEF1P35732 RFS1YBR052C 633 nt8.1□□□□□ -1.11
DEF1P35732 AAT1YKL106W 1356 nt8.1□□□□□ -1.11
DEF1P35732 SER2YGR208W 930 nt8.09□□□□□ -1.11
DEF1P35732 YIA6YIL006W 1122 nt8.09□□□□□ -1.11
DEF1P35732 SRP102YKL154W 735 nt8.09□□□□□ -1.11
DEF1P35732 LEA1YPL213W 717 nt8.09□□□□□ -1.11
DEF1P35732 SGF73YGL066W 1974 nt8.09□□□□□ -1.11
DEF1P35732 BRN1YBL097W 2265 nt8.09□□□□□ -1.11
DEF1P35732 YBL095WYBL095W 813 nt8.08□□□□□ -1.12
DEF1P35732 ENO1YGR254W 1314 nt8.07□□□□□ -1.12
DEF1P35732 RIB1YBL033C 1038 nt8.07□□□□□ -1.12
DEF1P35732 CYC8YBR112C 2901 nt8.06□□□□□ -1.12
DEF1P35732 KGD2YDR148C 1392 nt8.06□□□□□ -1.12
DEF1P35732 RQC1YDR333C 2172 nt8.05□□□□□ -1.12
DEF1P35732 HTS1YPR033C 1641 nt8.05□□□□□ -1.12
DEF1P35732 YPT11YNL304W 1254 nt8.05□□□□□ -1.12
DEF1P35732 TOD6YBL054W 1578 nt8.05□□□□□ -1.12
DEF1P35732 PET494YNR045W 1470 nt8.03□□□□□ -1.12
DEF1P35732 SEC24YIL109C 2781 nt8.03□□□□□ -1.12
DEF1P35732 HXK2YGL253W 1461 nt8.02□□□□□ -1.13
DEF1P35732 ERO1YML130C 1692 nt8.02□□□□□ -1.13
DEF1P35732 YFR020WYFR020W 699 nt8.01□□□□□ -1.13
DEF1P35732 SBP1YHL034C 885 nt8.01□□□□□ -1.13
DEF1P35732 YLR030WYLR030W 792 nt8.01□□□□□ -1.13
DEF1P35732 YLR280CYLR280C 351 nt8.01□□□□□ -1.13
DEF1P35732 POP1YNL221C 2628 nt8.01□□□□□ -1.13
DEF1P35732 MET13YGL125W 1803 nt8.01□□□□□ -1.13
DEF1P35732 HXT15YDL245C 1704 nt8□□□□□ -1.13
DEF1P35732 HXT16YJR158W 1704 nt8□□□□□ -1.13
DEF1P35732 MKK1YOR231W 1527 nt8□□□□□ -1.13
DEF1P35732 SOD2YHR008C 702 nt8□□□□□ -1.13
DEF1P35732 BMT5YIL096C 1011 nt8□□□□□ -1.13
DEF1P35732 MGM101YJR144W 810 nt8□□□□□ -1.13
DEF1P35732 YMR007WYMR007W 381 nt8□□□□□ -1.13
DEF1P35732 YMC2YBR104W 990 nt8□□□□□ -1.13
DEF1P35732 GAS1YMR307W 1680 nt7.99□□□□□ -1.13
DEF1P35732 YGR210CYGR210C 1236 nt7.99□□□□□ -1.13
DEF1P35732 YBL070CYBL070C 321 nt7.98□□□□□ -1.13
DEF1P35732 YGR127WYGR127W 939 nt7.97□□□□□ -1.13
DEF1P35732 RRN10YBL025W 438 nt7.97□□□□□ -1.13
DEF1P35732 PTC6YCR079W 1329 nt7.97□□□□□ -1.13
DEF1P35732 GTT3YEL017W 1014 nt7.96□□□□□ -1.14
DEF1P35732 GPM1YKL152C 744 nt7.96□□□□□ -1.14
DEF1P35732 SRN2YLR119W 642 nt7.96□□□□□ -1.14
DEF1P35732 TOM20YGR082W 552 nt7.95□□□□□ -1.14
DEF1P35732 RCR1YBR005W 642 nt7.95□□□□□ -1.14
DEF1P35732 YPL108WYPL108W 507 nt7.95□□□□□ -1.14
DEF1P35732 TGA1tA(UGC)A 73 nt7.94□□□□□ -1.14
DEF1P35732 tA(UGC)EtA(UGC)E 73 nt7.94□□□□□ -1.14
DEF1P35732 tA(UGC)GtA(UGC)G 73 nt7.94□□□□□ -1.14
DEF1P35732 tA(UGC)LtA(UGC)L 73 nt7.94□□□□□ -1.14
DEF1P35732 tA(UGC)OtA(UGC)O 73 nt7.94□□□□□ -1.14
DEF1P35732 FPR2YDR519W 408 nt7.94□□□□□ -1.14
DEF1P35732 LCP5YER127W 1074 nt7.94□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 61.5 ms