Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prrt1O35449 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prrt1O35449 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prrt1O35449 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prrt1O35449 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prrt1O35449 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.62■□□□□ 0.73
Prrt1O35449 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prrt1O35449 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Prrt1O35449 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prrt1O35449 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prrt1O35449 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prrt1O35449 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prrt1O35449 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prrt1O35449 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Prrt1O35449 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prrt1O35449 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prrt1O35449 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prrt1O35449 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.58■□□□□ 0.72
Prrt1O35449 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prrt1O35449 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prrt1O35449 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prrt1O35449 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prrt1O35449 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prrt1O35449 Gm26115-201ENSMUST00000175605 87 ntBASIC19.56■□□□□ 0.72
Prrt1O35449 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prrt1O35449 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prrt1O35449 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prrt1O35449 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prrt1O35449 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prrt1O35449 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prrt1O35449 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prrt1O35449 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prrt1O35449 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prrt1O35449 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.54■□□□□ 0.72
Prrt1O35449 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prrt1O35449 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Prrt1O35449 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prrt1O35449 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prrt1O35449 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prrt1O35449 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prrt1O35449 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prrt1O35449 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prrt1O35449 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prrt1O35449 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Prrt1O35449 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prrt1O35449 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prrt1O35449 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prrt1O35449 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Prrt1O35449 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prrt1O35449 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prrt1O35449 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Prrt1O35449 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prrt1O35449 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prrt1O35449 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.5■□□□□ 0.71
Prrt1O35449 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Prrt1O35449 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prrt1O35449 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.48■□□□□ 0.71
Prrt1O35449 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prrt1O35449 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prrt1O35449 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prrt1O35449 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prrt1O35449 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prrt1O35449 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prrt1O35449 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prrt1O35449 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Prrt1O35449 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prrt1O35449 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prrt1O35449 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prrt1O35449 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt1O35449 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt1O35449 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt1O35449 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prrt1O35449 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.45■□□□□ 0.7
Prrt1O35449 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prrt1O35449 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Prrt1O35449 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt1O35449 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt1O35449 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Prrt1O35449 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Prrt1O35449 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Prrt1O35449 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prrt1O35449 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt1O35449 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt1O35449 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt1O35449 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt1O35449 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Prrt1O35449 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt1O35449 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt1O35449 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prrt1O35449 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prrt1O35449 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt1O35449 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt1O35449 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt1O35449 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt1O35449 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt1O35449 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt1O35449 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prrt1O35449 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt1O35449 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prrt1O35449 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms