Protein–RNA interactions for Protein: A0A1Y7VNZ0

Dcaf4, DDB1 and CUL4-associated factor 4, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dcaf4A0A1Y7VNZ0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.79■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.78■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.78■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Dcaf4A0A1Y7VNZ0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.76■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.74■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.74■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dcaf4A0A1Y7VNZ0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.67■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.67■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.65■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dcaf4A0A1Y7VNZ0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms