Protein–RNA interactions for Protein: A0A140LI04

Gm5890, Predicted gene 5890, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5890A0A140LI04 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5890A0A140LI04 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5890A0A140LI04 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5890A0A140LI04 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5890A0A140LI04 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5890A0A140LI04 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5890A0A140LI04 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5890A0A140LI04 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5890A0A140LI04 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5890A0A140LI04 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5890A0A140LI04 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm5890A0A140LI04 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5890A0A140LI04 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5890A0A140LI04 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm5890A0A140LI04 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5890A0A140LI04 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm5890A0A140LI04 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gm5890A0A140LI04 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5890A0A140LI04 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm5890A0A140LI04 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5890A0A140LI04 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5890A0A140LI04 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5890A0A140LI04 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5890A0A140LI04 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5890A0A140LI04 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5890A0A140LI04 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5890A0A140LI04 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5890A0A140LI04 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5890A0A140LI04 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5890A0A140LI04 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm5890A0A140LI04 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5890A0A140LI04 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5890A0A140LI04 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5890A0A140LI04 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm5890A0A140LI04 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm5890A0A140LI04 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5890A0A140LI04 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5890A0A140LI04 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5890A0A140LI04 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5890A0A140LI04 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5890A0A140LI04 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5890A0A140LI04 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Gm5890A0A140LI04 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5890A0A140LI04 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5890A0A140LI04 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5890A0A140LI04 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm5890A0A140LI04 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm5890A0A140LI04 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5890A0A140LI04 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5890A0A140LI04 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5890A0A140LI04 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5890A0A140LI04 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5890A0A140LI04 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm5890A0A140LI04 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm5890A0A140LI04 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm5890A0A140LI04 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Gm5890A0A140LI04 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5890A0A140LI04 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5890A0A140LI04 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5890A0A140LI04 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5890A0A140LI04 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5890A0A140LI04 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5890A0A140LI04 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5890A0A140LI04 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm5890A0A140LI04 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm5890A0A140LI04 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm5890A0A140LI04 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.7■□□□□ 0.58
Gm5890A0A140LI04 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm5890A0A140LI04 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm5890A0A140LI04 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm5890A0A140LI04 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm5890A0A140LI04 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms