Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL353748.2-201ENST00000622148 471 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 ZNF519P1-201ENST00000449011 1626 ntBASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
TMEM88BA6NKF7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC007159.1-201ENST00000566529 4706 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 SPRR2C-201ENST00000290702 219 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 Y_RNA.135-201ENST00000363439 95 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 Y_RNA.197-201ENST00000364004 102 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RNA5SP235-201ENST00000365411 114 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RNU6-214P-201ENST00000384130 107 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AL357515.1-201ENST00000402967 542 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RPS12P24-201ENST00000412619 387 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC092809.3-201ENST00000415453 231 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 ATG3P1-201ENST00000419507 911 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AL353748.1-201ENST00000440753 474 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RPL32P28-201ENST00000443577 397 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RPL23AP2-201ENST00000471227 466 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 UQCRHP4-201ENST00000471686 272 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC026801.1-201ENST00000497178 464 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC006499.6-201ENST00000511169 607 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RNU1-6P-201ENST00000516290 144 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RNU1-54P-201ENST00000517181 120 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC069113.1-201ENST00000517763 267 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RNU6-323P-201ENST00000521915 107 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AP003730.1-201ENST00000524605 285 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 MIR5692C1-201ENST00000585309 91 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 HMGN2P28-201ENST00000606102 262 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 AC011755.1-201ENST00000623763 2049 ntBASIC5.64□□□□□ -1.51
TMEM88BA6NKF7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 SNORA71.3-201ENST00000362582 128 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 SNORA73.1-201ENST00000363107 205 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 RN7SKP267-201ENST00000410381 285 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AL513331.1-201ENST00000411908 397 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 RPL23AP26-201ENST00000412728 464 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 CRYBB2P1-203ENST00000415709 538 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC140479.3-201ENST00000418944 1126 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC244098.2-201ENST00000422068 99 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 BX679664.2-201ENST00000439282 283 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC000111.2-201ENST00000448200 210 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 HSPE1P6-201ENST00000479457 291 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 RN7SL810P-201ENST00000493031 276 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC091868.1-201ENST00000508746 304 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 MTCYBP40-201ENST00000509390 1135 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 RNU6-143P-201ENST00000516942 93 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 ELOCP31-201ENST00000540463 467 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 FAM60BP-201ENST00000578364 658 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 MIR5699-201ENST00000578903 90 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 RN7SL176P-201ENST00000580352 264 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 PISRT1.1-201ENST00000616930 107 ntBASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEM88BA6NKF7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.62□□□□□ -1.51
TMEM88BA6NKF7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMEM88BA6NKF7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TMEM88BA6NKF7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms