Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 TMEM251P1-201ENST00000503717 318 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 DSTNP2-201ENST00000504533 515 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 MLLT10P2-201ENST00000506434 249 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 KLHL2P1-201ENST00000508691 521 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC079140.3-201ENST00000511111 550 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 RNU6-720P-201ENST00000516363 108 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 RNU6-678P-201ENST00000516832 109 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC024224.1-201ENST00000538284 609 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 OR7K1P-201ENST00000546439 926 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 SETP7-201ENST00000552169 453 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC007954.1-201ENST00000554198 494 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AP003465.2-201ENST00000602571 373 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AL136363.2-201ENST00000604173 851 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC005332.10-201ENST00000612725 619 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AL355810.1-201ENST00000614629 552 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC025588.4-201ENST00000615802 908 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AL353748.2-201ENST00000622148 471 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AL356585.4-201ENST00000623078 1229 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AL359740.1-201ENST00000624340 592 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AC005832.2-201ENST00000538921 1430 ntBASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX43Q9NXZ2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC097714.1-201ENST00000511272 1647 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 U3.4-201ENST00000363352 213 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 TPMTP3-201ENST00000411928 735 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 RPS7P13-201ENST00000413955 498 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 RPL7P30-201ENST00000420888 709 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 RPS25P9-201ENST00000435591 252 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC005019.1-201ENST00000436455 431 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 TRIM60P18-201ENST00000441518 828 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC005297.2-201ENST00000450430 606 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 Z82190.1-201ENST00000454534 490 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 USP9YP10-201ENST00000454868 628 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 COX7A2P2-201ENST00000505291 250 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 HSPD1P15-201ENST00000505573 1122 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC105914.1-201ENST00000511798 226 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 RNU6-583P-201ENST00000516012 92 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 SNRPGP16-201ENST00000533275 226 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 OR6C7P-201ENST00000547875 934 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC008507.1-201ENST00000587506 734 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC007179.3-201ENST00000604976 235 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AL031667.3-201ENST00000620124 655 ntBASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
DDX43Q9NXZ2 AC007256.1-201ENST00000392253 2765 ntBASIC3.65□□□□□ -1.82
DDX43Q9NXZ2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
DDX43Q9NXZ2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 RNA5SP295-201ENST00000362655 121 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 RNA5SP387-201ENST00000364226 106 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 RNA5SP267-201ENST00000364893 126 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 DEFB108C-201ENST00000400154 252 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 RN7SKP111-201ENST00000410349 271 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 RNU6-55P-201ENST00000411092 107 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 RNU6-954P-201ENST00000411355 107 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 AL137014.1-201ENST00000420490 1226 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 MTCO2P34-201ENST00000421994 607 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 MTCYBP39-201ENST00000437562 491 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 OR6C5P-201ENST00000452388 923 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 KATNBL1P6-201ENST00000453433 915 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 RPL23AP31-201ENST00000456160 467 ntBASIC3.65□□□□□ -1.83
DDX43Q9NXZ2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms