Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
NFKB1P19838 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NFKB1P19838 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.33□□□□□ -1.56
NFKB1P19838 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NFKB1P19838 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 AC097461.1-201ENST00000568928 2821 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 AC092376.2-201ENST00000622621 4116 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NFKB1P19838 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
NFKB1P19838 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
NFKB1P19838 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 Y_RNA.26-201ENST00000362539 101 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 RNA5SP223-201ENST00000365174 120 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 RNU6-45P-201ENST00000384471 107 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NFKB1P19838 AL590135.1-201ENST00000422215 156 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 BX276092.3-201ENST00000424182 230 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.32□□□□□ -1.56
NFKB1P19838 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.32□□□□□ -1.56
NFKB1P19838 AL133396.1-201ENST00000432048 687 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 RPS17P8-201ENST00000434525 335 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.32□□□□□ -1.56
NFKB1P19838 MTCO3P8-201ENST00000453691 755 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AC234775.1-201ENST00000454247 670 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.32□□□□□ -1.56
NFKB1P19838 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.32□□□□□ -1.56
NFKB1P19838 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.32□□□□□ -1.56
NFKB1P19838 AC090151.1-201ENST00000520784 730 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AP006587.4-201ENST00000526053 529 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.32□□□□□ -1.56
NFKB1P19838 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 AC127381.1-201ENST00000555979 939 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
NFKB1P19838 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.32□□□□□ -1.56
NFKB1P19838 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.32□□□□□ -1.56
NFKB1P19838 FKBP1AP1-201ENST00000594588 318 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AC069307.1-201ENST00000602820 447 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AC074140.1-201ENST00000621617 208 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AL512643.1-201ENST00000635735 524 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 ZNF72P-201ENST00000425869 1908 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.32□□□□□ -1.56
NFKB1P19838 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 OR9K1P-202ENST00000641111 3217 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 AL022322.2-201ENST00000624072 20397 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NFKB1P19838 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NFKB1P19838 AC008079.2-201ENST00000623543 20396 ntBASIC5.32□□□□□ -1.56
NFKB1P19838 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NFKB1P19838 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NFKB1P19838 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
NFKB1P19838 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.31□□□□□ -1.56
NFKB1P19838 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NFKB1P19838 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
NFKB1P19838 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NFKB1P19838 RNA5SP183-201ENST00000362452 119 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 Y_RNA.64-201ENST00000362845 102 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RN7SKP160-201ENST00000363804 340 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RNA5SP90-201ENST00000364801 99 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RNU6-596P-201ENST00000365395 98 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RNU6-1329P-201ENST00000365664 107 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NFKB1P19838 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NFKB1P19838 Y_RNA.785-201ENST00000384290 109 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 SNORA67-201ENST00000384423 137 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 Y_RNA.526-201ENST00000384572 110 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RNU6-1156P-201ENST00000410365 100 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AC092809.3-201ENST00000415453 231 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.31□□□□□ -1.56
NFKB1P19838 CFL1P1-202ENST00000432948 411 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.31□□□□□ -1.56
NFKB1P19838 GAPDHP58-201ENST00000438477 1006 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RPS3AP12-201ENST00000443616 753 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 FCF1P4-201ENST00000448326 183 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AC239809.1-201ENST00000450470 217 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RPL23AP31-201ENST00000456160 467 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AP000942.1-201ENST00000463969 747 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AP000926.1-201ENST00000479573 241 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
NFKB1P19838 RPS4XP1-201ENST00000482189 787 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 NDUFB5P1-201ENST00000508134 564 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 Y_RNA.673-201ENST00000516306 88 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 RNU6-182P-201ENST00000516970 105 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 GSTP1P1-201ENST00000548078 319 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.31□□□□□ -1.56
NFKB1P19838 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.31□□□□□ -1.56
NFKB1P19838 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.31□□□□□ -1.56
NFKB1P19838 AC040958.1-201ENST00000561102 201 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.31□□□□□ -1.56
NFKB1P19838 MIR4660-201ENST00000583549 74 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AC067852.3-201ENST00000589177 561 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms