Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 Y_RNA.625-201ENST00000411256 107 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RAC1P3-201ENST00000416129 580 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 SSXP9-201ENST00000417503 292 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 REREP1Y-201ENST00000422655 198 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RPS27AP12-201ENST00000429552 465 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 REREP2Y-201ENST00000439103 200 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RPL12P39-201ENST00000455456 496 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RNU7-169P-201ENST00000459456 61 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC113155.1-201ENST00000511141 769 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC109329.1-201ENST00000518744 317 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 SNRPGP16-201ENST00000533275 226 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC126615.2-201ENST00000553003 515 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC009852.2-201ENST00000567898 485 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 MIR4512-201ENST00000583257 77 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 FKBP1AP1-201ENST00000594588 318 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC006363.1-201ENST00000603806 463 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC010201.1-201ENST00000605051 540 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 MIR6748-201ENST00000610433 71 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 RPSAP73-201ENST00000614820 330 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AC068870.1-201ENST00000563737 2455 ntBASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB9Q9Y5E1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 SAR1AP2-201ENST00000392696 594 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 RPL11P3-201ENST00000395256 523 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 HSPE1P8-201ENST00000406997 288 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 CYCSP33-201ENST00000414485 327 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 MTCO3P19-201ENST00000415864 321 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 RPS11P1-201ENST00000451072 473 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 CEACAMP6-201ENST00000452007 574 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 LINC01399-202ENST00000458450 244 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 RN7SL72P-201ENST00000460697 269 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 COPS8P2-201ENST00000473228 627 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 RN7SL826P-201ENST00000479724 288 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 RN7SKP92-201ENST00000517266 244 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 AC004584.2-201ENST00000570407 410 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 MIR548AC-201ENST00000585049 88 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 IMMP1LP3-201ENST00000604197 224 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF285B-201ENST00000561698 1767 ntBASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB9Q9Y5E1 SRRM1P3-201ENST00000426911 2678 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AC015813.6-201ENST00000624409 5808 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 FAM91A3P-201ENST00000456826 2544 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AL157777.2-201ENST00000258070 137 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 Y_RNA.416-201ENST00000384014 113 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 Y_RNA.534-201ENST00000384599 112 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms