Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3□□□□□ -1.93
HDAC3O15379 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HDAC3O15379 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
HDAC3O15379 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3□□□□□ -1.93
HDAC3O15379 MIR200C-201ENST00000384980 68 ntBASIC3□□□□□ -1.93
HDAC3O15379 AL049545.1-201ENST00000401856 572 ntBASIC3□□□□□ -1.93
HDAC3O15379 RNU6-757P-201ENST00000410334 100 ntBASIC3□□□□□ -1.93
HDAC3O15379 RNU2-42P-201ENST00000410697 113 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC092634.6-201ENST00000418558 192 ntBASIC3□□□□□ -1.93
HDAC3O15379 MRPS36P1-201ENST00000421291 307 ntBASIC3□□□□□ -1.93
HDAC3O15379 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3□□□□□ -1.93
HDAC3O15379 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3□□□□□ -1.93
HDAC3O15379 AC011233.1-201ENST00000422812 283 ntBASIC3□□□□□ -1.93
HDAC3O15379 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3□□□□□ -1.93
HDAC3O15379 RPL36P19-201ENST00000430744 301 ntBASIC3□□□□□ -1.93
HDAC3O15379 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3□□□□□ -1.93
HDAC3O15379 USP9YP22-201ENST00000438971 294 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC092393.1-201ENST00000439625 742 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3□□□□□ -1.93
HDAC3O15379 OR6K5P-201ENST00000447050 945 ntBASIC3□□□□□ -1.93
HDAC3O15379 RN7SL499P-201ENST00000481141 276 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC108734.3-201ENST00000481241 1165 ntBASIC3□□□□□ -1.93
HDAC3O15379 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3□□□□□ -1.93
HDAC3O15379 AC116353.3-201ENST00000511215 249 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC026403.1-201ENST00000518938 295 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC087373.1-201ENST00000524920 491 ntBASIC3□□□□□ -1.93
HDAC3O15379 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3□□□□□ -1.93
HDAC3O15379 AP000790.1-201ENST00000528891 737 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC005832.3-201ENST00000537929 631 ntBASIC3□□□□□ -1.93
HDAC3O15379 HIGD1AP17-201ENST00000554576 276 ntBASIC3□□□□□ -1.93
HDAC3O15379 DUXAP1-201ENST00000556632 463 ntBASIC3□□□□□ -1.93
HDAC3O15379 GTF2IP8-201ENST00000560687 584 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3□□□□□ -1.93
HDAC3O15379 AC017100.2-201ENST00000584628 355 ntBASIC3□□□□□ -1.93
HDAC3O15379 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3□□□□□ -1.93
HDAC3O15379 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3□□□□□ -1.93
HDAC3O15379 RPL23AP88-201ENST00000605759 454 ntBASIC3□□□□□ -1.93
HDAC3O15379 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3□□□□□ -1.93
HDAC3O15379 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3□□□□□ -1.93
HDAC3O15379 AC116618.1-201ENST00000634617 774 ntBASIC3□□□□□ -1.93
HDAC3O15379 MIR1322-201ENST00000638013 71 ntBASIC3□□□□□ -1.93
HDAC3O15379 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HDAC3O15379 AL161431.1-201ENST00000618966 4205 ntBASIC3□□□□□ -1.93
HDAC3O15379 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HDAC3O15379 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HDAC3O15379 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
HDAC3O15379 AL161912.2-201ENST00000565707 3007 ntBASIC3□□□□□ -1.93
HDAC3O15379 AC108206.1-201ENST00000570186 4159 ntBASIC3□□□□□ -1.93
HDAC3O15379 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HDAC3O15379 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HDAC3O15379 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC3O15379 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.99□□□□□ -1.93
HDAC3O15379 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HDAC3O15379 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC3O15379 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HDAC3O15379 MIR670-201ENST00000390142 98 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 RNU6-1300P-201ENST00000391046 108 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC068533.2-201ENST00000411872 306 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC063979.1-201ENST00000415539 377 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC009518.2-201ENST00000418056 731 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 TXNL1P1-201ENST00000429528 554 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 MTND5P25-201ENST00000430499 799 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC091286.1-201ENST00000431233 461 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 ATP5F1P1-201ENST00000433775 569 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AL008629.1-201ENST00000438615 184 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 RPL23AP58-201ENST00000440453 469 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC3O15379 RPS26P56-201ENST00000444468 240 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 COX6CP2-201ENST00000444980 225 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC3O15379 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC3O15379 AC117522.2-201ENST00000510049 657 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 RPL7L1P13-201ENST00000511702 739 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC118465.1-201ENST00000513820 1271 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 RNU6-1129P-201ENST00000515964 104 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 SNORA48.10-201ENST00000516965 160 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 HSPE1P20-201ENST00000538133 289 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC3O15379 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC3O15379 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.99□□□□□ -1.93
HDAC3O15379 AC138915.2-201ENST00000569776 97 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 ZNF415P1-201ENST00000582279 1166 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.99□□□□□ -1.93
HDAC3O15379 AL158042.1-201ENST00000605338 460 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC008962.1-201ENST00000605729 304 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC3O15379 AC100793.4-201ENST00000613683 429 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AL355365.1-201ENST00000616480 294 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AC131159.1-201ENST00000621854 213 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC3O15379 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HDAC3O15379 AC104454.1-201ENST00000421341 1401 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 ZNF807-201ENST00000328088 1707 ntBASIC2.99□□□□□ -1.93
HDAC3O15379 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HDAC3O15379 AC091564.4-201ENST00000533934 2194 ntBASIC2.98□□□□□ -1.93
HDAC3O15379 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC3O15379 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HDAC3O15379 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms