Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 CD177P1-201ENST00000606252 935 ntBASIC16.75■□□□□ 0.27
CDH20Q9HBT6 AC066615.1-201ENST00000640911 628 ntBASIC16.75■□□□□ 0.27
CDH20Q9HBT6 AL031985.4-201ENST00000642138 673 ntBASIC16.75■□□□□ 0.27
CDH20Q9HBT6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 AC113410.3-201ENST00000623366 203 ntBASIC16.74■□□□□ 0.27
CDH20Q9HBT6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH20Q9HBT6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH20Q9HBT6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 LINC01465-201ENST00000408887 1940 ntBASIC16.72■□□□□ 0.27
CDH20Q9HBT6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 AC104417.2-201ENST00000562989 1793 ntBASIC16.72■□□□□ 0.27
CDH20Q9HBT6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH20Q9HBT6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms