Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RN7SL283P-201ENST00000489055 303 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 AC007016.1-201ENST00000512110 244 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 AC015795.1-201ENST00000513669 327 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHB3P54753 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 AC008782.1-201ENST00000603386 430 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.89□□□□□ -1.63
EPHB3P54753 AC243654.2-201ENST00000612843 443 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RMST_9.1-201ENST00000619945 193 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHB3P54753 AC022418.1-201ENST00000624118 445 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHB3P54753 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHB3P54753 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHB3P54753 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHB3P54753 PHKBP1-201ENST00000450951 1951 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 ELL2P4-201ENST00000446870 1376 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 MTND4P1-201ENST00000457501 1466 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.88□□□□□ -1.63
EPHB3P54753 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
EPHB3P54753 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHB3P54753 AC091046.3-201ENST00000631455 1574 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.88□□□□□ -1.63
EPHB3P54753 Y_RNA.148-201ENST00000363557 117 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 Y_RNA.367-201ENST00000365544 101 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 Y_RNA.414-201ENST00000384011 101 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 RNU6-38P-201ENST00000384085 107 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 RNU6-1013P-201ENST00000384180 107 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 RNU6-921P-201ENST00000384361 107 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 Y_RNA.530-201ENST00000384587 101 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 MIR92A2-201ENST00000385299 75 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AP000580.1-201ENST00000404439 358 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AL078604.1-201ENST00000404609 466 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHB3P54753 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHB3P54753 RPS15AP12-201ENST00000419498 388 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 E2F6P2-201ENST00000420708 748 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHB3P54753 AL732292.1-201ENST00000426692 226 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHB3P54753 AC004938.1-201ENST00000438468 308 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHB3P54753 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 RNU6-333P-201ENST00000459117 107 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 RNU7-66P-201ENST00000459469 62 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.88□□□□□ -1.63
EPHB3P54753 RPL23AP41-201ENST00000484754 458 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AC009902.1-201ENST00000519351 183 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AP001804.3-201ENST00000525146 880 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHB3P54753 OR5B10P-201ENST00000532869 642 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.88□□□□□ -1.63
EPHB3P54753 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHB3P54753 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHB3P54753 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHB3P54753 MIR4680-201ENST00000580906 66 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AC105224.1-201ENST00000587055 421 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 VN1R84P-201ENST00000593697 235 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AL022099.1-201ENST00000604551 712 ntBASIC4.88□□□□□ -1.63
EPHB3P54753 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.88□□□□□ -1.63
EPHB3P54753 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.88□□□□□ -1.63
EPHB3P54753 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
EPHB3P54753 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.88□□□□□ -1.63
EPHB3P54753 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EPHB3P54753 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
EPHB3P54753 MFSD8-242ENST00000641690 4199 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 RAD17P1-201ENST00000418130 2042 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
EPHB3P54753 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
EPHB3P54753 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
EPHB3P54753 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
EPHB3P54753 EIF5P1-201ENST00000400019 1231 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 AL603908.1-201ENST00000406098 201 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 RNU6-985P-201ENST00000410182 104 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 RN7SKP158-201ENST00000410453 326 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 RNA5SP296-201ENST00000410523 111 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 GSTM3P2-201ENST00000412746 530 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
EPHB3P54753 RPS20P5-201ENST00000434808 360 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 RPL23AP74-201ENST00000437246 471 ntBASIC4.87□□□□□ -1.63
EPHB3P54753 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms