Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-842P-201ENST00000384269 107 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 MT-TW-201ENST00000387382 68 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 RNU1-77P-201ENST00000390868 162 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 MIR1302-6-201ENST00000408466 90 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 RN7SKP126-201ENST00000411143 300 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 RN7SKP293-201ENST00000411389 296 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.43□□□□□ -1.54
NFKB1P19838 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.43□□□□□ -1.54
NFKB1P19838 PSMA2P3-201ENST00000429685 675 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 AC097713.2-201ENST00000430199 356 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 RPL12P18-201ENST00000437175 325 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.43□□□□□ -1.54
NFKB1P19838 AC011816.1-201ENST00000441346 546 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.43□□□□□ -1.54
NFKB1P19838 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.43□□□□□ -1.54
NFKB1P19838 GAPDHP25-201ENST00000447061 1001 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 FABP5P13-201ENST00000452144 328 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.43□□□□□ -1.54
NFKB1P19838 RPL9P32-201ENST00000464118 620 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 MTND1P19-201ENST00000511780 315 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.43□□□□□ -1.54
NFKB1P19838 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.43□□□□□ -1.54
NFKB1P19838 AL589674.2-201ENST00000604304 337 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 AL138825.1-201ENST00000618587 192 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
NFKB1P19838 AC008758.3-201ENST00000507003 1829 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
NFKB1P19838 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.43□□□□□ -1.54
NFKB1P19838 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.42□□□□□ -1.54
NFKB1P19838 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.42□□□□□ -1.54
NFKB1P19838 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.42□□□□□ -1.54
NFKB1P19838 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NFKB1P19838 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.42□□□□□ -1.54
NFKB1P19838 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 RNU1-19P-201ENST00000363306 165 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 RNVU1-3-201ENST00000364313 161 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
NFKB1P19838 AC097374.1-203ENST00000400783 485 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 HSPA8P15-201ENST00000401676 786 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 UBE2FP1-201ENST00000416536 447 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.42□□□□□ -1.54
NFKB1P19838 AC010655.1-201ENST00000449336 292 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.42□□□□□ -1.54
NFKB1P19838 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.42□□□□□ -1.54
NFKB1P19838 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.42□□□□□ -1.54
NFKB1P19838 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.42□□□□□ -1.54
NFKB1P19838 RFPL4AP5-201ENST00000514977 504 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 RNA5SP362-201ENST00000516048 118 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 IGLVIV-53-201ENST00000520107 367 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.42□□□□□ -1.54
NFKB1P19838 HMGB1P40-201ENST00000525121 540 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.42□□□□□ -1.54
NFKB1P19838 OR5D17P-201ENST00000531492 978 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 AC025423.5-201ENST00000550230 219 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.42□□□□□ -1.54
NFKB1P19838 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.42□□□□□ -1.54
NFKB1P19838 HMGB1P50-201ENST00000605814 607 ntBASIC5.42□□□□□ -1.54
NFKB1P19838 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.42□□□□□ -1.54
NFKB1P19838 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NFKB1P19838 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NFKB1P19838 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.42□□□□□ -1.54
NFKB1P19838 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NFKB1P19838 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NFKB1P19838 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.41□□□□□ -1.54
NFKB1P19838 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
NFKB1P19838 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.41□□□□□ -1.54
NFKB1P19838 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.41□□□□□ -1.54
NFKB1P19838 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 Y_RNA.14-201ENST00000362415 103 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 Y_RNA.126-201ENST00000363382 111 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 SNORA23-201ENST00000365128 182 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 Y_RNA.483-201ENST00000384380 101 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 MIR548M-201ENST00000408260 86 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 RNA5SP487-201ENST00000410186 122 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 RNU2-38P-201ENST00000410856 79 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 RNA5SP111-201ENST00000411386 101 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 RPL12P34-201ENST00000424532 479 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 AL591704.1-201ENST00000432574 275 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 AL645568.3-201ENST00000433683 316 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 CYCSP12-201ENST00000437729 300 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 GAPDHP27-201ENST00000447427 1020 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms