Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 Y_RNA.19-201ENST00000362462 99 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RNY1P16-201ENST00000363063 111 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-1155P-201ENST00000363554 107 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RNY3P11-201ENST00000364153 102 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RNU4-50P-201ENST00000364361 141 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 SNORD73A-201ENST00000386062 65 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RPL21P67-201ENST00000402896 478 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 MIR1286-201ENST00000408112 78 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 BMS1P17-202ENST00000416720 316 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AL590135.1-201ENST00000422215 156 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 PPP1R11P2-201ENST00000423543 382 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AL662874.1-201ENST00000426065 230 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 MRPL48P1-201ENST00000445390 636 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC105399.1-202ENST00000447303 205 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RPS17P15-201ENST00000475609 349 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RPS27AP13-201ENST00000498403 237 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC105384.2-201ENST00000508433 640 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC108043.1-201ENST00000512696 574 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 Y_RNA.673-201ENST00000516306 88 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 OR4H12P-201ENST00000556269 907 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC090517.1-201ENST00000569307 266 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 HMGB2P1-201ENST00000591146 634 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AC005344.1-201ENST00000613391 459 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 SDR42E1P2-201ENST00000614861 481 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SL544P-201ENST00000617232 284 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 SDR42E1P4-201ENST00000620894 481 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SL763P-201ENST00000620922 284 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 MIR4496-201ENST00000635896 61 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 U2.22-201ENST00000636441 106 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AL596275.2-204ENST00000641628 552 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 AL596275.2-206ENST00000641957 626 ntBASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB9Q9Y5E1 SAGE2P-201ENST00000420011 2126 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AP005435.3-201ENST00000531260 3198 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 Y_RNA.48-201ENST00000362710 103 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AL445529.1-201ENST00000398713 389 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 CRIP1P1-201ENST00000427567 185 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 FRG2FP-204ENST00000453982 852 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 RPL32P33-201ENST00000487023 394 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SL184P-201ENST00000488308 297 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC009120.1-201ENST00000493458 473 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-1095P-201ENST00000516148 108 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-789P-201ENST00000517105 102 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC021678.3-201ENST00000517893 476 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AL137100.2-201ENST00000555786 315 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AL049839.1-201ENST00000556151 657 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC096996.1-201ENST00000563813 325 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SL652P-201ENST00000577769 300 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 MIR4420-201ENST00000583944 77 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AL031601.2-202ENST00000622650 282 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 AC130454.1-201ENST00000622948 401 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 MIR4275-201ENST00000636486 87 ntBASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB9Q9Y5E1 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms