Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NFKB1P19838 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.45□□□□□ -1.54
NFKB1P19838 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NFKB1P19838 AC010615.1-201ENST00000594254 1764 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 RNA5SP335-201ENST00000363817 110 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 RN7SKP69-201ENST00000365390 305 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 RNU6-637P-201ENST00000384050 107 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 SNORD51-201ENST00000384320 80 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 AC096664.2-201ENST00000411843 406 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 RPL21P24-201ENST00000413752 448 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.45□□□□□ -1.54
NFKB1P19838 RPL19P16-201ENST00000433839 588 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 RPL12P11-201ENST00000439970 501 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 EEF1A1P1-201ENST00000447052 739 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 RPL12P20-201ENST00000475538 479 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 RN7SL101P-201ENST00000496350 279 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 Y_RNA.715-201ENST00000517082 110 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 IGHV3-76-201ENST00000522465 295 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.45□□□□□ -1.54
NFKB1P19838 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.45□□□□□ -1.54
NFKB1P19838 SETP7-201ENST00000552169 453 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.45□□□□□ -1.54
NFKB1P19838 SNORD95-201ENST00000579879 68 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.45□□□□□ -1.54
NFKB1P19838 AC098479.1-201ENST00000609225 154 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 AC109583.2-201ENST00000617367 129 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 SNHG22-203ENST00000617833 660 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 AC137590.2-201ENST00000619709 240 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 AL589994.2-201ENST00000621124 579 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 AP001784.1-201ENST00000624107 428 ntBASIC5.45□□□□□ -1.54
NFKB1P19838 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NFKB1P19838 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NFKB1P19838 RNU1-35P-201ENST00000362782 153 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 Y_RNA.60-201ENST00000362831 98 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 RNU6-1059P-201ENST00000363752 98 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 Y_RNA.276-201ENST00000364732 109 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NFKB1P19838 Y_RNA.515-201ENST00000384535 112 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AC005522.1-201ENST00000395416 346 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 RPL31P2-201ENST00000413849 377 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.44□□□□□ -1.54
NFKB1P19838 AC079809.1-201ENST00000415468 276 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.44□□□□□ -1.54
NFKB1P19838 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 RHOT1P3-201ENST00000436571 331 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.44□□□□□ -1.54
NFKB1P19838 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.44□□□□□ -1.54
NFKB1P19838 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NFKB1P19838 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 AC023141.9-201ENST00000458734 412 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AP000797.2-201ENST00000475768 606 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 RN7SL717P-201ENST00000478343 297 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 RN7SL547P-201ENST00000490793 290 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.44□□□□□ -1.54
NFKB1P19838 RNU6-1023P-201ENST00000516137 106 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 HMGN1P28-201ENST00000521340 364 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.44□□□□□ -1.54
NFKB1P19838 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.44□□□□□ -1.54
NFKB1P19838 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.44□□□□□ -1.54
NFKB1P19838 MIR3128-201ENST00000581957 66 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NFKB1P19838 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 AL606537.1-201ENST00000607258 2011 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 AL359547.2-201ENST00000615810 418 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NFKB1P19838 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.44□□□□□ -1.54
NFKB1P19838 U2.22-201ENST00000636441 106 ntBASIC5.44□□□□□ -1.54
NFKB1P19838 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NFKB1P19838 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
NFKB1P19838 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
NFKB1P19838 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NFKB1P19838 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.43□□□□□ -1.54
NFKB1P19838 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NFKB1P19838 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
NFKB1P19838 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NFKB1P19838 RNA5SP242-201ENST00000364171 118 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 SNORD14.1-201ENST00000365609 90 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 OR1L6-202ENST00000373684 1044 ntBASIC5.43□□□□□ -1.54
NFKB1P19838 RNU6-214P-201ENST00000384130 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms