Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
EPHB3P54753 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
EPHB3P54753 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 MTCO1P12-201ENST00000414273 1543 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.01□□□□□ -1.61
EPHB3P54753 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
EPHB3P54753 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.01□□□□□ -1.61
EPHB3P54753 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
EPHB3P54753 SNORD113.2-201ENST00000364166 89 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 SNORA62-201ENST00000365493 153 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 Y_RNA.452-201ENST00000384202 108 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 RNU1-82P-201ENST00000390851 165 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 RNY4P36-201ENST00000391116 96 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AL592114.1-201ENST00000403842 483 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 Y_RNA.605-201ENST00000410577 105 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC078974.1-201ENST00000411597 223 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AL591848.1-201ENST00000413092 322 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.01□□□□□ -1.61
EPHB3P54753 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.01□□□□□ -1.61
EPHB3P54753 RPS24P8-201ENST00000431490 402 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AL356276.2-201ENST00000435919 558 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 TPT1P12-201ENST00000448968 492 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.01□□□□□ -1.61
EPHB3P54753 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.01□□□□□ -1.61
EPHB3P54753 AC073073.1-201ENST00000493920 463 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 MTCO1P29-201ENST00000496868 288 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.01□□□□□ -1.61
EPHB3P54753 AC105417.1-201ENST00000514691 285 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC105031.1-201ENST00000518550 476 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.01□□□□□ -1.61
EPHB3P54753 AC022634.1-201ENST00000520765 532 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.01□□□□□ -1.61
EPHB3P54753 OR5BN1P-201ENST00000532955 829 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC068993.1-201ENST00000546724 589 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AL163153.1-201ENST00000554223 283 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC068831.4-201ENST00000556118 109 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 RN7SL652P-201ENST00000577769 300 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 MIR3149-201ENST00000584629 83 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.01□□□□□ -1.61
EPHB3P54753 AL355598.1-201ENST00000604169 202 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AP001330.4-201ENST00000604350 154 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC019193.3-201ENST00000609144 554 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.01□□□□□ -1.61
EPHB3P54753 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 AC091953.2-201ENST00000623979 160 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.01□□□□□ -1.61
EPHB3P54753 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.01□□□□□ -1.61
EPHB3P54753 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.01□□□□□ -1.61
EPHB3P54753 AC009313.2-201ENST00000417893 1941 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 LARP1BP1-201ENST00000506036 1359 ntBASIC5.01□□□□□ -1.61
EPHB3P54753 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
EPHB3P54753 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EPHB3P54753 AC104623.2-202ENST00000623477 4002 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC005332.5-201ENST00000591222 2919 ntBASIC5□□□□□ -1.61
EPHB3P54753 USP9YP4-201ENST00000424401 1745 ntBASIC5□□□□□ -1.61
EPHB3P54753 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5□□□□□ -1.61
EPHB3P54753 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
EPHB3P54753 Y_RNA.100-201ENST00000363141 102 ntBASIC5□□□□□ -1.61
EPHB3P54753 RNU6-831P-201ENST00000384548 107 ntBASIC5□□□□□ -1.61
EPHB3P54753 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 DHFRP6-201ENST00000401776 268 ntBASIC5□□□□□ -1.61
EPHB3P54753 AL591416.1-201ENST00000404015 867 ntBASIC5□□□□□ -1.61
EPHB3P54753 RN7SKP16-201ENST00000410180 299 ntBASIC5□□□□□ -1.61
EPHB3P54753 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 AL645608.4-201ENST00000423619 154 ntBASIC5□□□□□ -1.61
EPHB3P54753 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC104651.2-201ENST00000447549 528 ntBASIC5□□□□□ -1.61
EPHB3P54753 AL162591.2-201ENST00000449634 317 ntBASIC5□□□□□ -1.61
EPHB3P54753 RPL10P17-201ENST00000453852 316 ntBASIC5□□□□□ -1.61
EPHB3P54753 DHFRP3-201ENST00000455595 559 ntBASIC5□□□□□ -1.61
EPHB3P54753 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 RPS15AP1-201ENST00000457423 391 ntBASIC5□□□□□ -1.61
EPHB3P54753 APOOP2-201ENST00000461561 539 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 AL163973.1-201ENST00000484753 577 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 CCDC34P1-201ENST00000507441 517 ntBASIC5□□□□□ -1.61
EPHB3P54753 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms