Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC092079.1-201ENST00000558620 1985 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RNU6-108P-201ENST00000365558 107 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RNU6-730P-201ENST00000383954 104 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RNU6-574P-201ENST00000384265 107 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
EPHB3P54753 RPL21P67-201ENST00000402896 478 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RN7SKP106-201ENST00000410832 272 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RNU2-6P-201ENST00000411404 190 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.08□□□□□ -1.6
EPHB3P54753 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.08□□□□□ -1.6
EPHB3P54753 MTCO2P27-201ENST00000420740 428 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC233981.1-201ENST00000423224 461 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.08□□□□□ -1.6
EPHB3P54753 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.08□□□□□ -1.6
EPHB3P54753 PRPF38AP1-201ENST00000451976 933 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RPL12P20-201ENST00000475538 479 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RPL21P6-201ENST00000479171 504 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RN7SL346P-201ENST00000491561 294 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.08□□□□□ -1.6
EPHB3P54753 RN7SKP92-201ENST00000517266 244 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.08□□□□□ -1.6
EPHB3P54753 AC100784.1-201ENST00000522790 310 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.08□□□□□ -1.6
EPHB3P54753 PSMA2P1-201ENST00000526365 646 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.08□□□□□ -1.6
EPHB3P54753 AC018630.1-201ENST00000541376 925 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.08□□□□□ -1.6
EPHB3P54753 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.08□□□□□ -1.6
EPHB3P54753 AC022884.3-201ENST00000579571 248 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC100830.2-201ENST00000581636 240 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 RN7SL690P-201ENST00000582087 240 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 XIAPP1-201ENST00000603162 600 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 DPPA3P3-201ENST00000603842 430 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AL080274.1-201ENST00000605565 220 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 MIR378J-201ENST00000611988 109 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC040168.1-201ENST00000623594 991 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 AC010149.2-201ENST00000637608 315 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
EPHB3P54753 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
EPHB3P54753 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
EPHB3P54753 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 OR4G1P-203ENST00000641984 1631 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
EPHB3P54753 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.08□□□□□ -1.6
EPHB3P54753 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 DDX18P4-201ENST00000511690 1966 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
EPHB3P54753 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
EPHB3P54753 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.07□□□□□ -1.6
EPHB3P54753 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
EPHB3P54753 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 AL512646.1-201ENST00000269395 1077 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AC011155.1-201ENST00000316512 456 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 Y_RNA.395-201ENST00000383945 109 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 RNA5SP332-201ENST00000391063 115 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AC245054.2-201ENST00000415639 319 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 BEND7P1-201ENST00000422058 457 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.07□□□□□ -1.6
EPHB3P54753 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.07□□□□□ -1.6
EPHB3P54753 RPS15AP9-201ENST00000439856 381 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 BNIP3P2-201ENST00000441221 577 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 RPL7AP61-201ENST00000443410 636 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 CACYBPP2-201ENST00000453625 678 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 snoU13.1-201ENST00000459157 104 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 HMGN2P26-201ENST00000463169 339 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 RPL23AP71-201ENST00000470966 469 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AC027575.1-201ENST00000481064 460 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AC005741.1-201ENST00000511094 432 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.07□□□□□ -1.6
EPHB3P54753 RNU1-6P-201ENST00000516290 144 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 RN7SKP283-201ENST00000517197 270 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.07□□□□□ -1.6
EPHB3P54753 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.07□□□□□ -1.6
EPHB3P54753 AC022861.1-201ENST00000522981 663 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 SUB1P1-201ENST00000524415 382 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.07□□□□□ -1.6
EPHB3P54753 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.07□□□□□ -1.6
EPHB3P54753 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.07□□□□□ -1.6
EPHB3P54753 AC006349.1-201ENST00000555526 235 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AC068790.4-201ENST00000602474 263 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 7SK.7-201ENST00000603504 247 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 AL022401.1-201ENST00000619498 108 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 MIR6810-201ENST00000622701 70 ntBASIC5.07□□□□□ -1.6
EPHB3P54753 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
EPHB3P54753 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.07□□□□□ -1.6
EPHB3P54753 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
EPHB3P54753 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.06□□□□□ -1.6
EPHB3P54753 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms