Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 AC104237.2-201ENST00000612456 443 ntBASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 AL162233.1-201ENST00000620014 944 ntBASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 AC093010.3-201ENST00000570269 15214 ntBASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.26□□□□□ -1.89
SHANK3Q9BYB0 RLIMP2-201ENST00000427891 1563 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 SNORA80E-201ENST00000384744 137 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 MTCO3P31-201ENST00000405526 789 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 AL121882.1-201ENST00000422893 417 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 RPL23AP74-201ENST00000437246 471 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 TRBV1-201ENST00000476502 284 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 AC116337.1-201ENST00000509680 687 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 EIF4EP5-201ENST00000528228 640 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 MTND2P13-201ENST00000577438 1039 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 EXOC5P1-201ENST00000510543 1969 ntBASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.25□□□□□ -1.89
SHANK3Q9BYB0 SNORA64-201ENST00000384674 134 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 UBE2V2P1-201ENST00000434717 398 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AC090819.1-201ENST00000523800 1111 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AC069528.2-201ENST00000624849 1991 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 MTND5P19-201ENST00000424872 1794 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 RNU6-1263P-201ENST00000384601 106 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AL512633.1-201ENST00000399931 655 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AL137246.1-201ENST00000607072 977 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 AC110994.2-201ENST00000635481 492 ntBASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHANK3Q9BYB0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 XPOTP1-201ENST00000443317 2398 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 GTF2H2B-203ENST00000508065 1432 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 RNU6-1331P-201ENST00000363658 106 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 SNORA62.2-201ENST00000364672 152 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 SNORA70E-201ENST00000384492 135 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 AC098592.2-201ENST00000413158 265 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 AL356806.1-201ENST00000422524 916 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 SNRPGP9-201ENST00000456025 225 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 AC108471.1-201ENST00000513977 287 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHANK3Q9BYB0 RNU1-100P-201ENST00000365255 165 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 RN7SL297P-201ENST00000483161 293 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC108860.1-201ENST00000484521 383 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 RN7SKP34-201ENST00000516142 244 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC022616.2-201ENST00000523185 300 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC006254.3-201ENST00000603353 884 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC007423.1-201ENST00000605009 627 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC067852.7-201ENST00000623270 535 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 ZNF542P-204ENST00000482727 1305 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC069218.2-201ENST00000411665 344 ntBASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.22□□□□□ -1.89
SHANK3Q9BYB0 AC067838.1-201ENST00000606064 577 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms