Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 PRPF19P1-201ENST00000584766 898 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC010525.2-201ENST00000590920 195 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 AC011468.4-201ENST00000603942 409 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC008745.1-201ENST00000604064 271 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC115621.1-201ENST00000604653 858 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC010424.2-201ENST00000607594 443 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 MIR6853-201ENST00000619642 74 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC015908.5-201ENST00000623289 343 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHB3P54753 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHB3P54753 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHB3P54753 AC097504.1-201ENST00000515103 2415 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 RNF6P1-201ENST00000444889 1784 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 MAPK10-328ENST00000641553 4009 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.11□□□□□ -1.59
EPHB3P54753 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 RNU6-289P-201ENST00000364093 107 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 SNORA5.1-201ENST00000384275 131 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 RNU6-1105P-201ENST00000384774 107 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 U3.30-201ENST00000391308 210 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 MRPL42P2-201ENST00000403169 426 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 RNU6-272P-201ENST00000411028 104 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC009310.1-201ENST00000414414 451 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AL358176.2-201ENST00000425769 204 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 RPL36AP15-201ENST00000444514 266 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC000111.2-201ENST00000448200 210 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHB3P54753 RNU7-136P-201ENST00000458819 69 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 RNU7-27P-201ENST00000459281 62 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 RN7SL354P-201ENST00000469282 294 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 RPL5P22-201ENST00000480199 884 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 RPL7AP10-201ENST00000481016 791 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 MTND4LP22-201ENST00000508209 276 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC108471.1-201ENST00000513977 287 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 snoU109.6-201ENST00000516831 118 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 RNU6-1314P-201ENST00000517139 104 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 Y_RNA.719-201ENST00000517156 106 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.11□□□□□ -1.59
EPHB3P54753 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC133555.2-201ENST00000550213 292 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC099489.2-201ENST00000574976 260 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHB3P54753 AC022726.1-201ENST00000587475 207 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.11□□□□□ -1.59
EPHB3P54753 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EPHB3P54753 RPL26P30-202ENST00000602923 645 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AC023813.4-201ENST00000607580 580 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AC103710.3-201ENST00000608157 948 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 MIR7703-201ENST00000620784 77 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EPHB3P54753 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 RIOK3P1-201ENST00000418778 1528 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHB3P54753 MFSD8-216ENST00000641147 4009 ntBASIC5.11□□□□□ -1.59
EPHB3P54753 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHB3P54753 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
EPHB3P54753 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
EPHB3P54753 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHB3P54753 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EPHB3P54753 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHB3P54753 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHB3P54753 MIR369-201ENST00000362155 70 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RNU5E-1-201ENST00000362477 120 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RNU1-32P-201ENST00000363937 159 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 SNORA32.2-201ENST00000384049 122 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHB3P54753 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.1□□□□□ -1.59
EPHB3P54753 RNU2-28P-201ENST00000410457 189 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RNU2-39P-201ENST00000410604 198 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 RNA5SP345-201ENST00000410646 108 ntBASIC5.1□□□□□ -1.59
EPHB3P54753 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms