Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PPARGC1BQ86YN6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PPARGC1BQ86YN6 SDHAP1-207ENST00000440850 2000 ntBASIC30.32■■■□□ 2.44
PPARGC1BQ86YN6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PPARGC1BQ86YN6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 MAX-217ENST00000557277 728 ntTSL 3 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PPARGC1BQ86YN6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 TUBB8P6-201ENST00000436895 1288 ntBASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
PPARGC1BQ86YN6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
PPARGC1BQ86YN6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PPARGC1BQ86YN6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 KRT8P8-201ENST00000434750 1448 ntBASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 AL032819.2-201ENST00000624543 2162 ntBASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PPARGC1BQ86YN6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
PPARGC1BQ86YN6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC30.26■■■□□ 2.44
PPARGC1BQ86YN6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC30.26■■■□□ 2.43
PPARGC1BQ86YN6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms