Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC012339.2-201ENST00000523996 453 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AL109766.1-201ENST00000555080 552 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 SUB1P2-201ENST00000556401 297 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.24□□□□□ -1.57
EPHB3P54753 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 TPMTP1-201ENST00000592307 737 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 AL133215.3-201ENST00000609801 448 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.24□□□□□ -1.57
EPHB3P54753 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.24□□□□□ -1.57
EPHB3P54753 AC019206.1-201ENST00000621938 425 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AC145207.9-201ENST00000623802 325 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 NMD3P1-201ENST00000439704 1488 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AC025574.1-201ENST00000554784 1653 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
EPHB3P54753 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.24□□□□□ -1.57
EPHB3P54753 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.24□□□□□ -1.57
EPHB3P54753 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
EPHB3P54753 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
EPHB3P54753 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 AC109446.4-201ENST00000623235 2755 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 SNRPEP3-201ENST00000338402 276 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RNU6-249P-201ENST00000363016 102 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RNVU1-6-201ENST00000364688 164 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 SNORA4.3-201ENST00000365564 137 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RNU6-463P-201ENST00000384340 107 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RPS4XP8-201ENST00000402039 771 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 AL161631.1-201ENST00000417933 486 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AL354766.1-201ENST00000423396 542 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RPL35AP12-201ENST00000425362 338 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RPL36AP53-201ENST00000432891 316 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC023347.2-201ENST00000433994 462 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 LSM1P1-201ENST00000438629 273 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RPL5P25-201ENST00000441148 775 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 MED28P3-201ENST00000444288 531 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 FGF7P3-201ENST00000454645 303 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RPS29P33-201ENST00000456717 146 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 Y_RNA.632-201ENST00000459189 102 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC017015.1-201ENST00000477387 286 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 IGLV2-34-201ENST00000490007 283 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
EPHB3P54753 RNU6-150P-201ENST00000516237 95 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 RNU6-1003P-201ENST00000517099 105 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.23□□□□□ -1.57
EPHB3P54753 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
EPHB3P54753 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC034105.3-201ENST00000565294 442 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.23□□□□□ -1.57
EPHB3P54753 MTCYBP13-201ENST00000578634 1093 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.23□□□□□ -1.57
EPHB3P54753 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC006116.10-201ENST00000591836 581 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC008638.3-201ENST00000603341 463 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC020910.3-201ENST00000603701 874 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 DISC2.1-201ENST00000612827 205 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.23□□□□□ -1.57
EPHB3P54753 AC090971.5-201ENST00000621102 293 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.23□□□□□ -1.57
EPHB3P54753 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 MTND5P1-201ENST00000445440 1375 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 LINC00622-201ENST00000562811 1570 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.23□□□□□ -1.57
EPHB3P54753 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
EPHB3P54753 AC093311.1-201ENST00000506586 2021 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 MTND5P16-201ENST00000460269 1703 ntBASIC5.23□□□□□ -1.57
EPHB3P54753 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.23□□□□□ -1.57
EPHB3P54753 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.23□□□□□ -1.57
EPHB3P54753 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
EPHB3P54753 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
EPHB3P54753 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.22□□□□□ -1.57
EPHB3P54753 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms