Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.25□□□□□ -1.57
EPHB3P54753 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.25□□□□□ -1.57
EPHB3P54753 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
EPHB3P54753 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
EPHB3P54753 Y_RNA.315-201ENST00000365117 102 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 RNU6-359P-201ENST00000365466 108 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 RNU6-769P-201ENST00000384407 104 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AL035079.1-201ENST00000405210 287 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 RNU2-50P-201ENST00000410494 143 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.25□□□□□ -1.57
EPHB3P54753 AC245028.1-201ENST00000423259 256 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AL589872.1-201ENST00000426602 288 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
EPHB3P54753 VTI1BP4-201ENST00000427516 527 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 OR2B7P-201ENST00000429302 934 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 RPL7P4-203ENST00000430239 730 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 BX276092.6-201ENST00000430476 250 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC024082.2-201ENST00000434771 238 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.25□□□□□ -1.57
EPHB3P54753 RPL12P18-201ENST00000437175 325 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 RPS29P9-201ENST00000440360 171 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC092809.1-201ENST00000441469 474 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.25□□□□□ -1.57
EPHB3P54753 RPL7P12-201ENST00000446719 750 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 RPS27AP15-201ENST00000447672 466 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 SLC25A18P1-201ENST00000449385 454 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 GAPDHP14-201ENST00000450472 937 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 BX276092.8-201ENST00000455722 250 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 BTF3P5-201ENST00000457252 467 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 MTCO1P42-201ENST00000457379 726 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 RN7SL738P-201ENST00000470264 297 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC006463.2-201ENST00000473326 348 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC023194.1-201ENST00000493084 308 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC103851.1-201ENST00000506833 274 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.25□□□□□ -1.57
EPHB3P54753 AC098976.1-201ENST00000513014 541 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.25□□□□□ -1.57
EPHB3P54753 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.25□□□□□ -1.57
EPHB3P54753 OR5B19P-201ENST00000531766 928 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.25□□□□□ -1.57
EPHB3P54753 BNIP3P1-201ENST00000547295 580 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.25□□□□□ -1.57
EPHB3P54753 NDUFB4P11-201ENST00000560510 395 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC018552.1-201ENST00000562099 811 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.25□□□□□ -1.57
EPHB3P54753 AC093249.1-201ENST00000567049 203 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC019322.1-201ENST00000571869 389 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.25□□□□□ -1.57
EPHB3P54753 AC091042.1-201ENST00000579213 173 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 MIR3668-201ENST00000582138 75 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 MIR3171-201ENST00000584270 74 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.25□□□□□ -1.57
EPHB3P54753 AL122125.1-201ENST00000616999 600 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC023509.5-201ENST00000617434 807 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 AC018926.3-201ENST00000618841 406 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.25□□□□□ -1.57
EPHB3P54753 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.25□□□□□ -1.57
EPHB3P54753 TCP11X1-202ENST00000622971 1372 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EPHB3P54753 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
EPHB3P54753 SAMMSON-226ENST00000642089 1582 ntBASIC5.25□□□□□ -1.57
EPHB3P54753 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
EPHB3P54753 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
EPHB3P54753 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
EPHB3P54753 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 Y_RNA.128-201ENST00000363391 112 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 Y_RNA.145-201ENST00000363527 102 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 SNORA62.2-201ENST00000364672 152 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 MIR192-201ENST00000384915 110 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 RPS4XP9-201ENST00000405151 780 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 RNA5SP113-201ENST00000410486 84 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AC073264.1-201ENST00000411508 416 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AL590139.1-201ENST00000416267 400 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 AL353678.1-201ENST00000422735 741 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.24□□□□□ -1.57
EPHB3P54753 OR51AB1P-201ENST00000429046 620 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.24□□□□□ -1.57
EPHB3P54753 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.24□□□□□ -1.57
EPHB3P54753 AC108059.2-201ENST00000434626 151 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 IPO7P1-201ENST00000442031 636 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 RPL17P49-201ENST00000443728 411 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 OR1H1P-201ENST00000448731 937 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.24□□□□□ -1.57
EPHB3P54753 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.24□□□□□ -1.57
EPHB3P54753 ST13P14-201ENST00000474095 734 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 RN7SL441P-201ENST00000492388 296 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.24□□□□□ -1.57
EPHB3P54753 RNU7-30P-201ENST00000516835 62 ntBASIC5.24□□□□□ -1.57
EPHB3P54753 RN7SKP116-201ENST00000516902 319 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 233.8 ms