Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
EPHB3P54753 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.41□□□□□ -1.54
EPHB3P54753 RPL21P110-201ENST00000433345 446 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AC138761.5-201ENST00000433967 325 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.41□□□□□ -1.54
EPHB3P54753 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.41□□□□□ -1.54
EPHB3P54753 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.41□□□□□ -1.54
EPHB3P54753 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.41□□□□□ -1.54
EPHB3P54753 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.41□□□□□ -1.54
EPHB3P54753 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.41□□□□□ -1.54
EPHB3P54753 RN7SL197P-201ENST00000466981 299 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.41□□□□□ -1.54
EPHB3P54753 AC048346.1-201ENST00000510247 144 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.41□□□□□ -1.54
EPHB3P54753 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.41□□□□□ -1.54
EPHB3P54753 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.41□□□□□ -1.54
EPHB3P54753 AC015917.1-201ENST00000579654 510 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AC011712.1-201ENST00000588959 234 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.41□□□□□ -1.54
EPHB3P54753 BNIP3P22-201ENST00000593399 556 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AC018695.5-201ENST00000605872 315 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.41□□□□□ -1.54
EPHB3P54753 AC091953.3-201ENST00000623220 236 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 PISRT1-201ENST00000626175 531 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.41□□□□□ -1.54
EPHB3P54753 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.41□□□□□ -1.54
EPHB3P54753 AL022311.1-201ENST00000623726 19416 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EPHB3P54753 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
EPHB3P54753 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
EPHB3P54753 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
EPHB3P54753 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.41□□□□□ -1.54
EPHB3P54753 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.41□□□□□ -1.54
EPHB3P54753 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
EPHB3P54753 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.4□□□□□ -1.54
EPHB3P54753 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 AC010266.2-201ENST00000564741 3255 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.4□□□□□ -1.54
EPHB3P54753 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
EPHB3P54753 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
EPHB3P54753 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 RN7SKP115-201ENST00000363177 317 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 Y_RNA.138-201ENST00000363462 102 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 RN7SKP113-201ENST00000363891 295 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 Y_RNA.419-201ENST00000384041 102 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 SNORA66-201ENST00000384792 133 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 MIR589-201ENST00000385238 99 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EPHB3P54753 TMSB4XP8-201ENST00000402089 135 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.4□□□□□ -1.54
EPHB3P54753 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.4□□□□□ -1.54
EPHB3P54753 TMSB4XP6-201ENST00000415187 135 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 TMBIM7P-201ENST00000418074 855 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC083875.1-201ENST00000419509 405 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.4□□□□□ -1.54
EPHB3P54753 TMSB4XP1-201ENST00000424567 135 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 USP9YP36-201ENST00000424581 829 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC073335.1-201ENST00000427776 363 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.4□□□□□ -1.54
EPHB3P54753 AL049745.1-201ENST00000433953 286 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.4□□□□□ -1.54
EPHB3P54753 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.4□□□□□ -1.54
EPHB3P54753 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.4□□□□□ -1.54
EPHB3P54753 AC140076.1-201ENST00000449897 361 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AL590365.1-201ENST00000450788 243 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 RPL26P28-201ENST00000451325 435 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 NIFKP7-201ENST00000503365 834 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.4□□□□□ -1.54
EPHB3P54753 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.4□□□□□ -1.54
EPHB3P54753 RNU6-1261P-201ENST00000517194 104 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.4□□□□□ -1.54
EPHB3P54753 AC008033.2-201ENST00000542626 177 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 NMNAT1P1-201ENST00000554095 876 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 RPL21P5-201ENST00000554662 472 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 TRAV15-201ENST00000556680 249 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.4□□□□□ -1.54
EPHB3P54753 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.4□□□□□ -1.54
EPHB3P54753 MIR3682-201ENST00000581338 84 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AL162413.1-201ENST00000603198 110 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AL391646.1-201ENST00000603860 190 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC011626.1-201ENST00000604710 562 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AC087783.2-201ENST00000605070 562 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 AL356274.1-201ENST00000617064 410 ntBASIC5.4□□□□□ -1.54
EPHB3P54753 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
EPHB3P54753 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.4□□□□□ -1.55
EPHB3P54753 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.4□□□□□ -1.55
EPHB3P54753 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
EPHB3P54753 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.4□□□□□ -1.55
EPHB3P54753 AC097461.1-201ENST00000568928 2821 ntBASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms