Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 CNN2P6-201ENST00000439038 900 ntBASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 NOC2LP2-201ENST00000407594 1944 ntBASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 AL355472.2-201ENST00000422958 438 ntBASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 AC069236.1-201ENST00000604339 616 ntBASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM56-RWDD3S4R434 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM56-RWDD3S4R434 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TMEM56-RWDD3S4R434 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.77■□□□□ 0.11
TMEM56-RWDD3S4R434 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM56-RWDD3S4R434 AC104417.2-201ENST00000562989 1793 ntBASIC15.77■□□□□ 0.11
TMEM56-RWDD3S4R434 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEM56-RWDD3S4R434 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM56-RWDD3S4R434 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM56-RWDD3S4R434 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 SDHAP1-207ENST00000440850 2000 ntBASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms