Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 RARRES2P10-201ENST00000564312 460 ntBASIC16.88■□□□□ 0.29
CDH20Q9HBT6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 AFG3L1P-217ENST00000557444 2447 ntBASIC16.87■□□□□ 0.29
CDH20Q9HBT6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH20Q9HBT6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH20Q9HBT6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 MIR718-201ENST00000390190 70 ntBASIC16.85■□□□□ 0.29
CDH20Q9HBT6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms