Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 AC105114.1-201ENST00000624795 1862 ntBASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB9Q9Y5E1 AL117339.4-201ENST00000608335 7063 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC097714.1-201ENST00000511272 1647 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 PPIAP24-201ENST00000328558 471 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC117470.1-201ENST00000381974 330 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-39P-201ENST00000384344 107 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 RN7SKP235-201ENST00000410662 305 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 GAPDHP33-201ENST00000443168 1013 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 UBBP5-201ENST00000446970 266 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC107399.1-201ENST00000451226 265 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 HMGB1P15-201ENST00000453854 435 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC094085.1-201ENST00000468914 584 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 RPL7L1P8-201ENST00000469911 741 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 SUMO2P7-201ENST00000511179 285 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AP003122.3-201ENST00000526316 255 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 TRIM51DP-201ENST00000529746 596 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC018552.3-201ENST00000567416 561 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 MIR4502-201ENST00000580432 81 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AL512782.1-201ENST00000603093 364 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 CR392039.4-201ENST00000624968 501 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AL591848.4-201ENST00000567832 3472 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 CUBNP3-201ENST00000457461 1784 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 AL139384.2-201ENST00000613809 3590 ntBASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB9Q9Y5E1 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL355377.1-201ENST00000621125 1653 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 LINC01613-201ENST00000561476 2780 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL139276.1-201ENST00000311910 1001 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-552P-201ENST00000362869 119 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 Y_RNA.112-201ENST00000363250 102 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-1207P-201ENST00000384343 107 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-316P-201ENST00000391027 107 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-903P-201ENST00000391270 109 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL024474.1-201ENST00000404655 591 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNA5SP431-201ENST00000410312 120 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-370P-201ENST00000411008 104 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-1304P-201ENST00000411374 106 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC017035.1-201ENST00000411999 1115 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL354890.1-201ENST00000413730 346 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AL929472.1-201ENST00000417484 429 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 NMD3P2-201ENST00000421815 761 ntBASIC6.68□□□□□ -1.34
PCDHB9Q9Y5E1 PRPF38AP2-201ENST00000438179 851 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 381.2 ms