Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 FAM201B-201ENST00000458407 597 ntBASIC18.71■□□□□ 0.59
KRT78Q8N1N4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 MIR4651-201ENST00000582622 73 ntBASIC18.71■□□□□ 0.59
KRT78Q8N1N4 AC073648.6-201ENST00000641589 218 ntBASIC18.71■□□□□ 0.59
KRT78Q8N1N4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 AC093484.2-201ENST00000580996 2166 ntBASIC18.7■□□□□ 0.58
KRT78Q8N1N4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 AL023875.1-201ENST00000640777 796 ntBASIC18.7■□□□□ 0.58
KRT78Q8N1N4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 AC116562.4-201ENST00000641316 2276 ntBASIC18.7■□□□□ 0.58
KRT78Q8N1N4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT78Q8N1N4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 KRASP1-201ENST00000407852 552 ntBASIC18.69■□□□□ 0.58
KRT78Q8N1N4 AC128676.1-201ENST00000454392 318 ntBASIC18.69■□□□□ 0.58
KRT78Q8N1N4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 RN7SL471P-201ENST00000580476 299 ntBASIC18.69■□□□□ 0.58
KRT78Q8N1N4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT78Q8N1N4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms