Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 AC116562.2-201ENST00000507042 360 ntBASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAP47Q5SQN1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 AL445675.2-201ENST00000620291 557 ntBASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAP47Q5SQN1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 LINC01568-207ENST00000641790 1380 ntBASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 NAPSB-206ENST00000562112 1266 ntBASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 AC131212.4-201ENST00000623606 975 ntBASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 CYP2D8P-201ENST00000433633 1490 ntBASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAP47Q5SQN1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 FSCN1P1-201ENST00000568912 1481 ntBASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 TMPOP1-202ENST00000424642 1267 ntBASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 RN7SL850P-201ENST00000579959 291 ntBASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 AC138932.1-201ENST00000534164 6830 ntBASIC18.8■□□□□ 0.6
SNAP47Q5SQN1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 FITM1-202ENST00000559294 800 ntBASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 AC005363.2-201ENST00000618631 242 ntBASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms