Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
COL1A2P08123 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.29■■□□□ 1
COL1A2P08123 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.29■■□□□ 1
COL1A2P08123 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.29■■□□□ 1
COL1A2P08123 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
COL1A2P08123 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.29■■□□□ 1
COL1A2P08123 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.29■■□□□ 1
COL1A2P08123 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
COL1A2P08123 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL1A2P08123 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.29■■□□□ 1
COL1A2P08123 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
COL1A2P08123 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.28■■□□□ 1
COL1A2P08123 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
COL1A2P08123 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
COL1A2P08123 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.28■■□□□ 1
COL1A2P08123 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 DUX4L26-201ENST00000489078 1255 ntBASIC21.28■■□□□ 1
COL1A2P08123 KRT18P35-201ENST00000510488 1269 ntBASIC21.28■■□□□ 1
COL1A2P08123 AC006011.2-201ENST00000621313 1158 ntBASIC21.28■■□□□ 1
COL1A2P08123 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.28■■□□□ 1
COL1A2P08123 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL1A2P08123 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.28■■□□□ 1
COL1A2P08123 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.28■■□□□ 1
COL1A2P08123 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL1A2P08123 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.27■■□□□ 1
COL1A2P08123 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.27■■□□□ 1
COL1A2P08123 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 AC104076.2-201ENST00000448912 469 ntBASIC21.27■■□□□ 1
COL1A2P08123 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
COL1A2P08123 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.27■■□□□ 1
COL1A2P08123 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL1A2P08123 AL138966.2-201ENST00000621997 464 ntBASIC21.27■■□□□ 1
COL1A2P08123 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.27■■□□□ 1
COL1A2P08123 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
COL1A2P08123 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL1A2P08123 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL1A2P08123 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL1A2P08123 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.26■□□□□ 0.99
COL1A2P08123 BX664615.1-201ENST00000443558 458 ntBASIC21.26■□□□□ 0.99
COL1A2P08123 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL1A2P08123 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
COL1A2P08123 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.26■□□□□ 0.99
COL1A2P08123 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.26■□□□□ 0.99
COL1A2P08123 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL1A2P08123 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.25■□□□□ 0.99
COL1A2P08123 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A2P08123 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A2P08123 AL512604.3-201ENST00000569583 964 ntBASIC21.25■□□□□ 0.99
COL1A2P08123 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.25■□□□□ 0.99
COL1A2P08123 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.25■□□□□ 0.99
COL1A2P08123 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A2P08123 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A2P08123 PKD1P6-201ENST00000343738 4769 ntBASIC21.25■□□□□ 0.99
COL1A2P08123 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL1A2P08123 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.25■□□□□ 0.99
COL1A2P08123 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL1A2P08123 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.25■□□□□ 0.99
COL1A2P08123 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.25■□□□□ 0.99
COL1A2P08123 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL1A2P08123 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms