Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 TCAF2P1-201ENST00000291129 2421 ntBASIC13.64□□□□□ -0.23
VPS25Q9BRG1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 AL353803.4-201ENST00000565882 1934 ntBASIC13.64□□□□□ -0.23
VPS25Q9BRG1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.64□□□□□ -0.23
VPS25Q9BRG1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS25Q9BRG1 AL512408.1-201ENST00000569378 2000 ntBASIC13.63□□□□□ -0.23
VPS25Q9BRG1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 AC021231.2-201ENST00000594613 730 ntBASIC13.62□□□□□ -0.23
VPS25Q9BRG1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 AC099778.1-201ENST00000568593 1911 ntBASIC13.62□□□□□ -0.23
VPS25Q9BRG1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS25Q9BRG1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms