Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lrrtm1Q8K377 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lrrtm1Q8K377 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lrrtm1Q8K377 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lrrtm1Q8K377 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lrrtm1Q8K377 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lrrtm1Q8K377 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lrrtm1Q8K377 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lrrtm1Q8K377 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Lrrtm1Q8K377 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lrrtm1Q8K377 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lrrtm1Q8K377 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lrrtm1Q8K377 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Lrrtm1Q8K377 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrtm1Q8K377 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrtm1Q8K377 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrtm1Q8K377 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrtm1Q8K377 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lrrtm1Q8K377 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrtm1Q8K377 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrtm1Q8K377 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrtm1Q8K377 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrtm1Q8K377 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrtm1Q8K377 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm1Q8K377 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm1Q8K377 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.93■□□□□ 0.78
Lrrtm1Q8K377 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrtm1Q8K377 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm1Q8K377 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm1Q8K377 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrtm1Q8K377 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.91■□□□□ 0.78
Lrrtm1Q8K377 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lrrtm1Q8K377 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm1Q8K377 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm1Q8K377 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrtm1Q8K377 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lrrtm1Q8K377 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lrrtm1Q8K377 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm1Q8K377 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lrrtm1Q8K377 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.9■□□□□ 0.78
Lrrtm1Q8K377 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Lrrtm1Q8K377 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrtm1Q8K377 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Lrrtm1Q8K377 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Lrrtm1Q8K377 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Lrrtm1Q8K377 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Lrrtm1Q8K377 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm1Q8K377 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrtm1Q8K377 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm1Q8K377 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm1Q8K377 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrtm1Q8K377 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm1Q8K377 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm1Q8K377 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm1Q8K377 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.87■□□□□ 0.77
Lrrtm1Q8K377 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrtm1Q8K377 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm1Q8K377 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm1Q8K377 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm1Q8K377 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrtm1Q8K377 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm1Q8K377 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm1Q8K377 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm1Q8K377 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrtm1Q8K377 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lrrtm1Q8K377 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lrrtm1Q8K377 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm1Q8K377 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm1Q8K377 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm1Q8K377 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm1Q8K377 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm1Q8K377 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm1Q8K377 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrtm1Q8K377 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Lrrtm1Q8K377 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrtm1Q8K377 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrtm1Q8K377 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrtm1Q8K377 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrtm1Q8K377 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Lrrtm1Q8K377 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.83■□□□□ 0.76
Lrrtm1Q8K377 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Lrrtm1Q8K377 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrtm1Q8K377 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrtm1Q8K377 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.82■□□□□ 0.76
Lrrtm1Q8K377 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.82■□□□□ 0.76
Lrrtm1Q8K377 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lrrtm1Q8K377 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm1Q8K377 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.81■□□□□ 0.76
Lrrtm1Q8K377 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm1Q8K377 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrtm1Q8K377 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lrrtm1Q8K377 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrtm1Q8K377 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms