Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 tA(AGC)PtA(AGC)P 73 nt7.08□□□□□ -1.28
RFU1Q08003 NAP1YKR048C 1254 nt7.08□□□□□ -1.28
RFU1Q08003 YIL108WYIL108W 2091 nt7.07□□□□□ -1.28
RFU1Q08003 MRS4YKR052C 915 nt7.07□□□□□ -1.28
RFU1Q08003 IPL1YPL209C 1104 nt7.07□□□□□ -1.28
RFU1Q08003 VBA3YCL069W 1377 nt7.07□□□□□ -1.28
RFU1Q08003 YJL064WYJL064W 396 nt7.05□□□□□ -1.28
RFU1Q08003 CYC3YAL039C 810 nt7.05□□□□□ -1.28
RFU1Q08003 AAT1YKL106W 1356 nt7.05□□□□□ -1.28
RFU1Q08003 YCR025CYCR025C 411 nt7.04□□□□□ -1.28
RFU1Q08003 AIM34YMR003W 597 nt7.04□□□□□ -1.28
RFU1Q08003 AAC3YBR085W 924 nt7.04□□□□□ -1.28
RFU1Q08003 TMS1YDR105C 1422 nt7.03□□□□□ -1.28
RFU1Q08003 PAU19YMR325W 375 nt7.03□□□□□ -1.28
RFU1Q08003 SRP102YKL154W 735 nt7.02□□□□□ -1.29
RFU1Q08003 TOP3YLR234W 1971 nt7.01□□□□□ -1.29
RFU1Q08003 YFR020WYFR020W 699 nt7.01□□□□□ -1.29
RFU1Q08003 YJL009WYJL009W 327 nt7.01□□□□□ -1.29
RFU1Q08003 YIR035CYIR035C 765 nt7□□□□□ -1.29
RFU1Q08003 YLR280CYLR280C 351 nt7□□□□□ -1.29
RFU1Q08003 YLR460CYLR460C 1131 nt6.99□□□□□ -1.29
RFU1Q08003 PUS7YOR243C 2031 nt6.99□□□□□ -1.29
RFU1Q08003 MSB3YNL293W 1902 nt6.99□□□□□ -1.29
RFU1Q08003 TRP2YER090W 1524 nt6.98□□□□□ -1.29
RFU1Q08003 EMC3YKL207W 762 nt6.98□□□□□ -1.29
RFU1Q08003 YJR149WYJR149W 1215 nt6.97□□□□□ -1.29
RFU1Q08003 BUB2YMR055C 921 nt6.97□□□□□ -1.29
RFU1Q08003 ADE16YLR028C 1776 nt6.97□□□□□ -1.29
RFU1Q08003 ERO1YML130C 1692 nt6.96□□□□□ -1.29
RFU1Q08003 FET5YFL041W 1869 nt6.96□□□□□ -1.29
RFU1Q08003 CHA1YCL064C 1083 nt6.96□□□□□ -1.3
RFU1Q08003 snR86snR86 1004 nt6.96□□□□□ -1.3
RFU1Q08003 SER2YGR208W 930 nt6.95□□□□□ -1.3
RFU1Q08003 CHS7YHR142W 951 nt6.95□□□□□ -1.3
RFU1Q08003 HXT13YEL069C 1695 nt6.95□□□□□ -1.3
RFU1Q08003 ITR1YDR497C 1755 nt6.95□□□□□ -1.3
RFU1Q08003 HTS1YPR033C 1641 nt6.94□□□□□ -1.3
RFU1Q08003 PFS2YNL317W 1398 nt6.94□□□□□ -1.3
RFU1Q08003 BAP3YDR046C 1815 nt6.93□□□□□ -1.3
RFU1Q08003 OLA1YBR025C 1185 nt6.93□□□□□ -1.3
RFU1Q08003 CMK2YOL016C 1344 nt6.93□□□□□ -1.3
RFU1Q08003 YNL040WYNL040W 1371 nt6.93□□□□□ -1.3
RFU1Q08003 HXT11YOL156W 1704 nt6.93□□□□□ -1.3
RFU1Q08003 SMC5YOL034W 3282 nt6.92□□□□□ -1.3
RFU1Q08003 ATO2YNR002C 849 nt6.92□□□□□ -1.3
RFU1Q08003 PUP1YOR157C 786 nt6.91□□□□□ -1.3
RFU1Q08003 YBR056WYBR056W 1506 nt6.91□□□□□ -1.3
RFU1Q08003 ATP10YLR393W 840 nt6.9□□□□□ -1.3
RFU1Q08003 snR4snR4 186 nt6.9□□□□□ -1.3
RFU1Q08003 HSV2YGR223C 1347 nt6.9□□□□□ -1.3
RFU1Q08003 YMR210WYMR210W 1350 nt6.9□□□□□ -1.31
RFU1Q08003 MAS2YHR024C 1449 nt6.9□□□□□ -1.31
RFU1Q08003 YGR210CYGR210C 1236 nt6.89□□□□□ -1.31
RFU1Q08003 YMR166CYMR166C 1107 nt6.89□□□□□ -1.31
RFU1Q08003 HEL1YKR017C 1656 nt6.88□□□□□ -1.31
RFU1Q08003 TGA1tA(UGC)A 73 nt6.88□□□□□ -1.31
RFU1Q08003 tA(UGC)EtA(UGC)E 73 nt6.88□□□□□ -1.31
RFU1Q08003 tA(UGC)GtA(UGC)G 73 nt6.88□□□□□ -1.31
RFU1Q08003 tA(UGC)LtA(UGC)L 73 nt6.88□□□□□ -1.31
RFU1Q08003 tA(UGC)OtA(UGC)O 73 nt6.88□□□□□ -1.31
RFU1Q08003 YCP4YCR004C 744 nt6.87□□□□□ -1.31
RFU1Q08003 MET22YOL064C 1074 nt6.87□□□□□ -1.31
RFU1Q08003 ORT1YOR130C 879 nt6.87□□□□□ -1.31
RFU1Q08003 PRC1YMR297W 1599 nt6.86□□□□□ -1.31
RFU1Q08003 SLG1YOR008C 1137 nt6.86□□□□□ -1.31
RFU1Q08003 HIS3YOR202W 663 nt6.86□□□□□ -1.31
RFU1Q08003 CDC13YDL220C 2775 nt6.86□□□□□ -1.31
RFU1Q08003 MEP1YGR121C 1479 nt6.85□□□□□ -1.31
RFU1Q08003 YCR061WYCR061W 1896 nt6.85□□□□□ -1.31
RFU1Q08003 OCH1YGL038C 1443 nt6.85□□□□□ -1.31
RFU1Q08003 SRM1YGL097W 1449 nt6.85□□□□□ -1.31
RFU1Q08003 CKI1YLR133W 1749 nt6.85□□□□□ -1.31
RFU1Q08003 YPL108WYPL108W 507 nt6.85□□□□□ -1.31
RFU1Q08003 LEA1YPL213W 717 nt6.85□□□□□ -1.31
RFU1Q08003 FCY1YPR062W 477 nt6.85□□□□□ -1.31
RFU1Q08003 SAM50YNL026W 1455 nt6.85□□□□□ -1.31
RFU1Q08003 CAK1YFL029C 1107 nt6.84□□□□□ -1.31
RFU1Q08003 ADH6YMR318C 1083 nt6.84□□□□□ -1.31
RFU1Q08003 YLR072WYLR072W 2082 nt6.84□□□□□ -1.31
RFU1Q08003 NDE2YDL085W 1638 nt6.83□□□□□ -1.32
RFU1Q08003 CRN1YLR429W 1956 nt6.83□□□□□ -1.32
RFU1Q08003 RNA170RNA170 169 nt6.83□□□□□ -1.32
RFU1Q08003 LSP1YPL004C 1026 nt6.83□□□□□ -1.32
RFU1Q08003 YRF1-1YDR545W 5391 nt6.83□□□□□ -1.32
RFU1Q08003 YRF1-5YLR467W 5391 nt6.83□□□□□ -1.32
RFU1Q08003 YRF1-8YOR396W 5391 nt6.83□□□□□ -1.32
RFU1Q08003 PDC6YGR087C 1692 nt6.83□□□□□ -1.32
RFU1Q08003 BUD31YCR063W 474 nt6.82□□□□□ -1.32
RFU1Q08003 RHO1YPR165W 630 nt6.82□□□□□ -1.32
RFU1Q08003 SWM1YDR260C 513 nt6.81□□□□□ -1.32
RFU1Q08003 RRT14YIL127C 621 nt6.81□□□□□ -1.32
RFU1Q08003 YMR007WYMR007W 381 nt6.81□□□□□ -1.32
RFU1Q08003 INO1YJL153C 1602 nt6.8□□□□□ -1.32
RFU1Q08003 SLM3YDL033C 1254 nt6.8□□□□□ -1.32
RFU1Q08003 YPT31YER031C 672 nt6.8□□□□□ -1.32
RFU1Q08003 ERG6YML008C 1152 nt6.8□□□□□ -1.32
RFU1Q08003 RCF1YML030W 480 nt6.8□□□□□ -1.32
RFU1Q08003 YMR253CYMR253C 1245 nt6.8□□□□□ -1.32
RFU1Q08003 RCR1YBR005W 642 nt6.8□□□□□ -1.32
RFU1Q08003 YGR137WYGR137W 375 nt6.79□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 78.3 ms