Protein–RNA interactions for Protein: Q06217

SMD2, Small nuclear ribonucleoprotein Sm D2, yeastyeast

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD2Q06217 UTR5YEL035C 501 nt8.95□□□□□ -0.98
SMD2Q06217 ADA2YDR448W 1305 nt8.95□□□□□ -0.98
SMD2Q06217 BXI1YNL305C 894 nt8.94□□□□□ -0.98
SMD2Q06217 AAT1YKL106W 1356 nt8.94□□□□□ -0.98
SMD2Q06217 MRP1YDR347W 966 nt8.93□□□□□ -0.98
SMD2Q06217 HRA1HRA1 564 nt8.93□□□□□ -0.98
SMD2Q06217 YLR173WYLR173W 1827 nt8.93□□□□□ -0.98
SMD2Q06217 RPS6AYPL090C 711 nt8.92□□□□□ -0.98
SMD2Q06217 RPS6BYBR181C 711 nt8.92□□□□□ -0.98
SMD2Q06217 MTO1YGL236C 2010 nt8.92□□□□□ -0.98
SMD2Q06217 ATP2YJR121W 1536 nt8.91□□□□□ -0.98
SMD2Q06217 snR86snR86 1004 nt8.91□□□□□ -0.98
SMD2Q06217 MFT1YML062C 1179 nt8.91□□□□□ -0.98
SMD2Q06217 YLR072WYLR072W 2082 nt8.9□□□□□ -0.99
SMD2Q06217 FET5YFL041W 1869 nt8.89□□□□□ -0.99
SMD2Q06217 GDH1YOR375C 1365 nt8.89□□□□□ -0.99
SMD2Q06217 YJL009WYJL009W 327 nt8.89□□□□□ -0.99
SMD2Q06217 RHO1YPR165W 630 nt8.89□□□□□ -0.99
SMD2Q06217 GNP1YDR508C 1992 nt8.88□□□□□ -0.99
SMD2Q06217 SHC1YER096W 1539 nt8.87□□□□□ -0.99
SMD2Q06217 ALR1YOL130W 2580 nt8.87□□□□□ -0.99
SMD2Q06217 MAS1YLR163C 1389 nt8.86□□□□□ -0.99
SMD2Q06217 MEP1YGR121C 1479 nt8.86□□□□□ -0.99
SMD2Q06217 PUP3YER094C 618 nt8.86□□□□□ -0.99
SMD2Q06217 TAD2YJL035C 753 nt8.86□□□□□ -0.99
SMD2Q06217 YPR084WYPR084W 1371 nt8.86□□□□□ -0.99
SMD2Q06217 YPT31YER031C 672 nt8.85□□□□□ -0.99
SMD2Q06217 ELP4YPL101W 1371 nt8.85□□□□□ -0.99
SMD2Q06217 EHT1YBR177C 1356 nt8.85□□□□□ -0.99
SMD2Q06217 NBA1YOL070C 1506 nt8.85□□□□□ -0.99
SMD2Q06217 RPL12BYDR418W 498 nt8.84□□□□□ -0.99
SMD2Q06217 YAL016C-AYAL016C-A 315 nt8.84□□□□□ -0.99
SMD2Q06217 TOM71YHR117W 1920 nt8.84□□□□□ -1
SMD2Q06217 THI6YPL214C 1623 nt8.83□□□□□ -1
SMD2Q06217 LRO1YNR008W 1986 nt8.83□□□□□ -1
SMD2Q06217 NSG2YNL156C 900 nt8.83□□□□□ -1
SMD2Q06217 TRP2YER090W 1524 nt8.83□□□□□ -1
SMD2Q06217 YIL177CYIL177C 5277 nt8.83□□□□□ -1
SMD2Q06217 tL(UAA)B1tL(UAA)B1 84 nt8.82□□□□□ -1
SMD2Q06217 tL(UAA)B2tL(UAA)B2 84 nt8.82□□□□□ -1
SMD2Q06217 tL(UAA)DtL(UAA)D 84 nt8.82□□□□□ -1
SMD2Q06217 SUP51tL(UAA)J 84 nt8.82□□□□□ -1
SMD2Q06217 tL(UAA)KtL(UAA)K 84 nt8.82□□□□□ -1
SMD2Q06217 tL(UAA)LtL(UAA)L 84 nt8.82□□□□□ -1
SMD2Q06217 tL(UAA)NtL(UAA)N 84 nt8.82□□□□□ -1
SMD2Q06217 HXT11YOL156W 1704 nt8.82□□□□□ -1
SMD2Q06217 THI73YLR004C 1572 nt8.82□□□□□ -1
SMD2Q06217 YMR206WYMR206W 942 nt8.81□□□□□ -1
SMD2Q06217 DUR3YHL016C 2208 nt8.8□□□□□ -1
SMD2Q06217 TIM50YPL063W 1431 nt8.8□□□□□ -1
SMD2Q06217 JHD1YER051W 1479 nt8.78□□□□□ -1
SMD2Q06217 HXT8YJL214W 1710 nt8.78□□□□□ -1
SMD2Q06217 TDH1YJL052W 999 nt8.78□□□□□ -1
SMD2Q06217 YHL008CYHL008C 1884 nt8.77□□□□□ -1.01
SMD2Q06217 ADE1YAR015W 921 nt8.77□□□□□ -1.01
SMD2Q06217 DIP5YPL265W 1827 nt8.76□□□□□ -1.01
SMD2Q06217 PMU1YKL128C 888 nt8.75□□□□□ -1.01
SMD2Q06217 PRE10YOR362C 867 nt8.75□□□□□ -1.01
SMD2Q06217 ABP1YCR088W 1779 nt8.75□□□□□ -1.01
SMD2Q06217 NUP53YMR153W 1428 nt8.74□□□□□ -1.01
SMD2Q06217 BUD31YCR063W 474 nt8.74□□□□□ -1.01
SMD2Q06217 EDC2YER035W 438 nt8.74□□□□□ -1.01
SMD2Q06217 YHL030W-AYHL030W-A 462 nt8.74□□□□□ -1.01
SMD2Q06217 YIL168WYIL168W 384 nt8.74□□□□□ -1.01
SMD2Q06217 RCF1YML030W 480 nt8.74□□□□□ -1.01
SMD2Q06217 HIS3YOR202W 663 nt8.74□□□□□ -1.01
SMD2Q06217 LEA1YPL213W 717 nt8.74□□□□□ -1.01
SMD2Q06217 MDL2YPL270W 2322 nt8.73□□□□□ -1.01
SMD2Q06217 SRM1YGL097W 1449 nt8.72□□□□□ -1.01
SMD2Q06217 YDR510C-AYDR510C-A 117 nt8.7□□□□□ -1.02
SMD2Q06217 TOS1YBR162C 1368 nt8.7□□□□□ -1.02
SMD2Q06217 GCD11YER025W 1584 nt8.69□□□□□ -1.02
SMD2Q06217 RTG2YGL252C 1767 nt8.69□□□□□ -1.02
SMD2Q06217 FUS3YBL016W 1062 nt8.69□□□□□ -1.02
SMD2Q06217 HXK1YFR053C 1458 nt8.69□□□□□ -1.02
SMD2Q06217 GLY1YEL046C 1164 nt8.68□□□□□ -1.02
SMD2Q06217 YJL043WYJL043W 774 nt8.68□□□□□ -1.02
SMD2Q06217 INO1YJL153C 1602 nt8.68□□□□□ -1.02
SMD2Q06217 NDE2YDL085W 1638 nt8.67□□□□□ -1.02
SMD2Q06217 TDA4YJR116W 840 nt8.67□□□□□ -1.02
SMD2Q06217 PSP2YML017W 1782 nt8.66□□□□□ -1.02
SMD2Q06217 WSC3YOL105C 1671 nt8.66□□□□□ -1.02
SMD2Q06217 WSC4YHL028W 1818 nt8.66□□□□□ -1.02
SMD2Q06217 SNU66YOR308C 1764 nt8.66□□□□□ -1.02
SMD2Q06217 KAE1YKR038C 1161 nt8.65□□□□□ -1.02
SMD2Q06217 ALG7YBR243C 1347 nt8.64□□□□□ -1.03
SMD2Q06217 ARO3YDR035W 1113 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)BtD(GUC)B 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)DtD(GUC)D 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)G1tD(GUC)G1 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)G2tD(GUC)G2 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)I1tD(GUC)I1 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)I2tD(GUC)I2 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)J1tD(GUC)J1 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)J2tD(GUC)J2 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)J3tD(GUC)J3 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)J4tD(GUC)J4 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)KtD(GUC)K 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)L1tD(GUC)L1 72 nt8.64□□□□□ -1.03
SMD2Q06217 tD(GUC)L2tD(GUC)L2 72 nt8.64□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 6.1 ms