Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 snR86snR86 1004 nt8.2□□□□□ -1.1
VPS9P54787 PDC6YGR087C 1692 nt8.19□□□□□ -1.1
VPS9P54787 RRT14YIL127C 621 nt8.19□□□□□ -1.1
VPS9P54787 EMC3YKL207W 762 nt8.19□□□□□ -1.1
VPS9P54787 TRP2YER090W 1524 nt8.19□□□□□ -1.1
VPS9P54787 YBR056WYBR056W 1506 nt8.19□□□□□ -1.1
VPS9P54787 RNA170RNA170 169 nt8.18□□□□□ -1.1
VPS9P54787 THI6YPL214C 1623 nt8.18□□□□□ -1.1
VPS9P54787 YJL160CYJL160C 864 nt8.17□□□□□ -1.1
VPS9P54787 YOR072WYOR072W 315 nt8.17□□□□□ -1.1
VPS9P54787 ERG6YML008C 1152 nt8.15□□□□□ -1.1
VPS9P54787 HBS1YKR084C 1836 nt8.15□□□□□ -1.11
VPS9P54787 MEP1YGR121C 1479 nt8.14□□□□□ -1.11
VPS9P54787 YLR072WYLR072W 2082 nt8.14□□□□□ -1.11
VPS9P54787 HXT11YOL156W 1704 nt8.14□□□□□ -1.11
VPS9P54787 YMR210WYMR210W 1350 nt8.13□□□□□ -1.11
VPS9P54787 PET18YCR020C 648 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)BtD(GUC)B 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)DtD(GUC)D 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)G1tD(GUC)G1 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)G2tD(GUC)G2 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)I1tD(GUC)I1 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)I2tD(GUC)I2 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)J1tD(GUC)J1 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)J2tD(GUC)J2 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)J3tD(GUC)J3 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)J4tD(GUC)J4 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)KtD(GUC)K 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)L1tD(GUC)L1 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)L2tD(GUC)L2 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)MtD(GUC)M 72 nt8.13□□□□□ -1.11
VPS9P54787 tD(GUC)OtD(GUC)O 72 nt8.13□□□□□ -1.11
VPS9P54787 RHO1YPR165W 630 nt8.13□□□□□ -1.11
VPS9P54787 YLR173WYLR173W 1827 nt8.13□□□□□ -1.11
VPS9P54787 YPT31YER031C 672 nt8.12□□□□□ -1.11
VPS9P54787 MIM1YOL026C 342 nt8.1□□□□□ -1.11
VPS9P54787 DUR3YHL016C 2208 nt8.1□□□□□ -1.11
VPS9P54787 YPR084WYPR084W 1371 nt8.1□□□□□ -1.11
VPS9P54787 MFT1YML062C 1179 nt8.09□□□□□ -1.11
VPS9P54787 THI73YLR004C 1572 nt8.09□□□□□ -1.11
VPS9P54787 YMR206WYMR206W 942 nt8.08□□□□□ -1.12
VPS9P54787 PUP3YER094C 618 nt8.07□□□□□ -1.12
VPS9P54787 YER156CYER156C 1017 nt8.07□□□□□ -1.12
VPS9P54787 BXI1YNL305C 894 nt8.07□□□□□ -1.12
VPS9P54787 HIS3YOR202W 663 nt8.07□□□□□ -1.12
VPS9P54787 RPS6AYPL090C 711 nt8.07□□□□□ -1.12
VPS9P54787 NME1NME1 340 nt8.07□□□□□ -1.12
VPS9P54787 RPS6BYBR181C 711 nt8.07□□□□□ -1.12
VPS9P54787 MEX67YPL169C 1800 nt8.06□□□□□ -1.12
VPS9P54787 POP2YNR052C 1302 nt8.05□□□□□ -1.12
VPS9P54787 LEA1YPL213W 717 nt8.05□□□□□ -1.12
VPS9P54787 EHT1YBR177C 1356 nt8.05□□□□□ -1.12
VPS9P54787 SRM1YGL097W 1449 nt8.04□□□□□ -1.12
VPS9P54787 SHC1YER096W 1539 nt8.04□□□□□ -1.12
VPS9P54787 NDE2YDL085W 1638 nt8.04□□□□□ -1.12
VPS9P54787 INO1YJL153C 1602 nt8.04□□□□□ -1.12
VPS9P54787 BUD31YCR063W 474 nt8.04□□□□□ -1.12
VPS9P54787 RCF1YML030W 480 nt8.04□□□□□ -1.12
VPS9P54787 LRO1YNR008W 1986 nt8.04□□□□□ -1.12
VPS9P54787 UTR5YEL035C 501 nt8.03□□□□□ -1.12
VPS9P54787 GRH1YDR517W 1119 nt8.02□□□□□ -1.13
VPS9P54787 NAS6YGR232W 687 nt8.02□□□□□ -1.13
VPS9P54787 YHL030W-AYHL030W-A 462 nt8.02□□□□□ -1.13
VPS9P54787 ORT1YOR130C 879 nt8.02□□□□□ -1.13
VPS9P54787 SNU66YOR308C 1764 nt8.02□□□□□ -1.13
VPS9P54787 YER152W-AYER152W-A 567 nt8.01□□□□□ -1.13
VPS9P54787 ABP1YCR088W 1779 nt8.01□□□□□ -1.13
VPS9P54787 YGR137WYGR137W 375 nt8□□□□□ -1.13
VPS9P54787 PRE10YOR362C 867 nt8□□□□□ -1.13
VPS9P54787 ADA2YDR448W 1305 nt8□□□□□ -1.13
VPS9P54787 PMU1YKL128C 888 nt7.99□□□□□ -1.13
VPS9P54787 MET8YBR213W 825 nt7.99□□□□□ -1.13
VPS9P54787 TDA4YJR116W 840 nt7.98□□□□□ -1.13
VPS9P54787 MLS1YNL117W 1665 nt7.98□□□□□ -1.13
VPS9P54787 WSC3YOL105C 1671 nt7.98□□□□□ -1.13
VPS9P54787 ATP2YJR121W 1536 nt7.98□□□□□ -1.13
VPS9P54787 HXT8YJL214W 1710 nt7.98□□□□□ -1.13
VPS9P54787 TIM50YPL063W 1431 nt7.97□□□□□ -1.13
VPS9P54787 DIP5YPL265W 1827 nt7.97□□□□□ -1.13
VPS9P54787 TGL5YOR081C 2250 nt7.97□□□□□ -1.13
VPS9P54787 YRF1-1YDR545W 5391 nt7.97□□□□□ -1.13
VPS9P54787 YRF1-5YLR467W 5391 nt7.97□□□□□ -1.13
VPS9P54787 YRF1-8YOR396W 5391 nt7.97□□□□□ -1.13
VPS9P54787 MRP1YDR347W 966 nt7.96□□□□□ -1.14
VPS9P54787 MGM101YJR144W 810 nt7.96□□□□□ -1.14
VPS9P54787 YNL140CYNL140C 570 nt7.96□□□□□ -1.14
VPS9P54787 TIF3YPR163C 1311 nt7.96□□□□□ -1.14
VPS9P54787 GDH1YOR375C 1365 nt7.96□□□□□ -1.14
VPS9P54787 ADE2YOR128C 1716 nt7.95□□□□□ -1.14
VPS9P54787 GLY1YEL046C 1164 nt7.95□□□□□ -1.14
VPS9P54787 INM1YHR046C 888 nt7.95□□□□□ -1.14
VPS9P54787 HRA1HRA1 564 nt7.95□□□□□ -1.14
VPS9P54787 PAU21YOR394W 495 nt7.95□□□□□ -1.14
VPS9P54787 PAU22YPL282C 495 nt7.95□□□□□ -1.14
VPS9P54787 ELP4YPL101W 1371 nt7.95□□□□□ -1.14
VPS9P54787 JHD1YER051W 1479 nt7.94□□□□□ -1.14
VPS9P54787 TAD2YJL035C 753 nt7.94□□□□□ -1.14
VPS9P54787 TDH1YJL052W 999 nt7.94□□□□□ -1.14
VPS9P54787 PAB1YER165W 1734 nt7.94□□□□□ -1.14
VPS9P54787 FTH1YBR207W 1398 nt7.94□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms