Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 MFT1YML062C 1179 nt11.45□□□□□ -0.58
SSM4P40318 YIR035CYIR035C 765 nt11.44□□□□□ -0.58
SSM4P40318 HRA1HRA1 564 nt11.43□□□□□ -0.58
SSM4P40318 MRP1YDR347W 966 nt11.41□□□□□ -0.58
SSM4P40318 MAE1YKL029C 2010 nt11.41□□□□□ -0.58
SSM4P40318 LRO1YNR008W 1986 nt11.41□□□□□ -0.58
SSM4P40318 HXT8YJL214W 1710 nt11.4□□□□□ -0.58
SSM4P40318 SRM1YGL097W 1449 nt11.4□□□□□ -0.58
SSM4P40318 GDH1YOR375C 1365 nt11.39□□□□□ -0.59
SSM4P40318 TOS1YBR162C 1368 nt11.39□□□□□ -0.59
SSM4P40318 YLR072WYLR072W 2082 nt11.39□□□□□ -0.59
SSM4P40318 PUP3YER094C 618 nt11.39□□□□□ -0.59
SSM4P40318 HXT11YOL156W 1704 nt11.38□□□□□ -0.59
SSM4P40318 TPO4YOR273C 1980 nt11.37□□□□□ -0.59
SSM4P40318 YPT31YER031C 672 nt11.37□□□□□ -0.59
SSM4P40318 ABP1YCR088W 1779 nt11.37□□□□□ -0.59
SSM4P40318 YPR084WYPR084W 1371 nt11.37□□□□□ -0.59
SSM4P40318 ADE1YAR015W 921 nt11.35□□□□□ -0.59
SSM4P40318 YMR206WYMR206W 942 nt11.35□□□□□ -0.59
SSM4P40318 TAD2YJL035C 753 nt11.35□□□□□ -0.59
SSM4P40318 YAL016C-AYAL016C-A 315 nt11.35□□□□□ -0.59
SSM4P40318 ATP2YJR121W 1536 nt11.34□□□□□ -0.59
SSM4P40318 JHD1YER051W 1479 nt11.33□□□□□ -0.6
SSM4P40318 EHT1YBR177C 1356 nt11.32□□□□□ -0.6
SSM4P40318 INO1YJL153C 1602 nt11.32□□□□□ -0.6
SSM4P40318 TDH1YJL052W 999 nt11.32□□□□□ -0.6
SSM4P40318 DIP5YPL265W 1827 nt11.31□□□□□ -0.6
SSM4P40318 NCA3YJL116C 1014 nt11.31□□□□□ -0.6
SSM4P40318 NBA1YOL070C 1506 nt11.3□□□□□ -0.6
SSM4P40318 YHL030W-AYHL030W-A 462 nt11.28□□□□□ -0.6
SSM4P40318 RPL12BYDR418W 498 nt11.27□□□□□ -0.61
SSM4P40318 TIM50YPL063W 1431 nt11.26□□□□□ -0.61
SSM4P40318 ALG7YBR243C 1347 nt11.26□□□□□ -0.61
SSM4P40318 YJL043WYJL043W 774 nt11.26□□□□□ -0.61
SSM4P40318 APT1YML022W 564 nt11.26□□□□□ -0.61
SSM4P40318 FTH1YBR207W 1398 nt11.25□□□□□ -0.61
SSM4P40318 HIS3YOR202W 663 nt11.25□□□□□ -0.61
SSM4P40318 HAC1YFL031W 717 nt11.24□□□□□ -0.61
SSM4P40318 BUD31YCR063W 474 nt11.23□□□□□ -0.61
SSM4P40318 LEA1YPL213W 717 nt11.23□□□□□ -0.61
SSM4P40318 ARO3YDR035W 1113 nt11.22□□□□□ -0.61
SSM4P40318 NUP53YMR153W 1428 nt11.22□□□□□ -0.61
SSM4P40318 RCF1YML030W 480 nt11.2□□□□□ -0.62
SSM4P40318 RRT6YGL146C 936 nt11.19□□□□□ -0.62
SSM4P40318 tD(GUC)BtD(GUC)B 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)DtD(GUC)D 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)G1tD(GUC)G1 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)G2tD(GUC)G2 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)I1tD(GUC)I1 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)I2tD(GUC)I2 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)J1tD(GUC)J1 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)J2tD(GUC)J2 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)J3tD(GUC)J3 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)J4tD(GUC)J4 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)KtD(GUC)K 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)L1tD(GUC)L1 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)L2tD(GUC)L2 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)MtD(GUC)M 72 nt11.18□□□□□ -0.62
SSM4P40318 tD(GUC)OtD(GUC)O 72 nt11.18□□□□□ -0.62
SSM4P40318 PRE10YOR362C 867 nt11.18□□□□□ -0.62
SSM4P40318 YHL008CYHL008C 1884 nt11.17□□□□□ -0.62
SSM4P40318 WSC4YHL028W 1818 nt11.17□□□□□ -0.62
SSM4P40318 MRN1YPL184C 1839 nt11.17□□□□□ -0.62
SSM4P40318 EDC2YER035W 438 nt11.16□□□□□ -0.62
SSM4P40318 PET494YNR045W 1470 nt11.15□□□□□ -0.62
SSM4P40318 FUS3YBL016W 1062 nt11.13□□□□□ -0.63
SSM4P40318 SNP1YIL061C 903 nt11.12□□□□□ -0.63
SSM4P40318 MTC6YHR151C 1581 nt11.12□□□□□ -0.63
SSM4P40318 PSP2YML017W 1782 nt11.1□□□□□ -0.63
SSM4P40318 ELP6YMR312W 822 nt11.09□□□□□ -0.63
SSM4P40318 PNS1YOR161C 1620 nt11.09□□□□□ -0.63
SSM4P40318 DST1YGL043W 930 nt11.09□□□□□ -0.63
SSM4P40318 NDE2YDL085W 1638 nt11.08□□□□□ -0.64
SSM4P40318 GLY1YEL046C 1164 nt11.08□□□□□ -0.64
SSM4P40318 MRP7YNL005C 1116 nt11.08□□□□□ -0.64
SSM4P40318 YOR268CYOR268C 399 nt11.08□□□□□ -0.64
SSM4P40318 ESBP6YNL125C 2022 nt11.08□□□□□ -0.64
SSM4P40318 BAP3YDR046C 1815 nt11.06□□□□□ -0.64
SSM4P40318 PMU1YKL128C 888 nt11.06□□□□□ -0.64
SSM4P40318 ARG7YMR062C 1326 nt11.06□□□□□ -0.64
SSM4P40318 SPR1YOR190W 1338 nt11.06□□□□□ -0.64
SSM4P40318 TGL5YOR081C 2250 nt11.06□□□□□ -0.64
SSM4P40318 YDR476CYDR476C 675 nt11.04□□□□□ -0.64
SSM4P40318 WSC3YOL105C 1671 nt11.03□□□□□ -0.64
SSM4P40318 TDA4YJR116W 840 nt11.02□□□□□ -0.65
SSM4P40318 YLR358CYLR358C 564 nt11.01□□□□□ -0.65
SSM4P40318 YML034C-AYML034C-A 399 nt11.01□□□□□ -0.65
SSM4P40318 MIM1YOL026C 342 nt11.01□□□□□ -0.65
SSM4P40318 INM1YHR046C 888 nt11□□□□□ -0.65
SSM4P40318 TPO1YLL028W 1761 nt11□□□□□ -0.65
SSM4P40318 CPT1YNL130C 1182 nt10.98□□□□□ -0.65
SSM4P40318 YNL140CYNL140C 570 nt10.98□□□□□ -0.65
SSM4P40318 snR4snR4 186 nt10.98□□□□□ -0.65
SSM4P40318 TIF3YPR163C 1311 nt10.97□□□□□ -0.65
SSM4P40318 MFG1YDL233W 1377 nt10.97□□□□□ -0.65
SSM4P40318 HAM1YJR069C 594 nt10.96□□□□□ -0.65
SSM4P40318 ERV25YML012W 636 nt10.95□□□□□ -0.66
SSM4P40318 ORT1YOR130C 879 nt10.95□□□□□ -0.66
SSM4P40318 MNN9YPL050C 1188 nt10.95□□□□□ -0.66
SSM4P40318 PRE5YMR314W 705 nt10.94□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms