Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YNL140CYNL140C 570 nt7.94□□□□□ -1.14
TDA11P38854 ATO2YNR002C 849 nt7.94□□□□□ -1.14
TDA11P38854 RPL2AYFR031C-A 765 nt7.93□□□□□ -1.14
TDA11P38854 MRN1YPL184C 1839 nt7.92□□□□□ -1.14
TDA11P38854 NSG2YNL156C 900 nt7.91□□□□□ -1.14
TDA11P38854 POB3YML069W 1659 nt7.91□□□□□ -1.14
TDA11P38854 YIL108WYIL108W 2091 nt7.91□□□□□ -1.14
TDA11P38854 YJL009WYJL009W 327 nt7.9□□□□□ -1.14
TDA11P38854 YBR056WYBR056W 1506 nt7.88□□□□□ -1.15
TDA11P38854 MEP1YGR121C 1479 nt7.88□□□□□ -1.15
TDA11P38854 LRO1YNR008W 1986 nt7.88□□□□□ -1.15
TDA11P38854 GLY1YEL046C 1164 nt7.88□□□□□ -1.15
TDA11P38854 CDD1YLR245C 429 nt7.88□□□□□ -1.15
TDA11P38854 RTG2YGL252C 1767 nt7.88□□□□□ -1.15
TDA11P38854 AMF1YOR378W 1548 nt7.88□□□□□ -1.15
TDA11P38854 MAS2YHR024C 1449 nt7.87□□□□□ -1.15
TDA11P38854 RIB1YBL033C 1038 nt7.87□□□□□ -1.15
TDA11P38854 ECM10YEL030W 1935 nt7.87□□□□□ -1.15
TDA11P38854 IGD1YFR017C 588 nt7.86□□□□□ -1.15
TDA11P38854 SPS100YHR139C 981 nt7.86□□□□□ -1.15
TDA11P38854 GAS1YMR307W 1680 nt7.86□□□□□ -1.15
TDA11P38854 BUD31YCR063W 474 nt7.85□□□□□ -1.15
TDA11P38854 INM1YHR046C 888 nt7.85□□□□□ -1.15
TDA11P38854 INO1YJL153C 1602 nt7.85□□□□□ -1.15
TDA11P38854 PMT1YDL095W 2454 nt7.84□□□□□ -1.15
TDA11P38854 YIA6YIL006W 1122 nt7.84□□□□□ -1.15
TDA11P38854 TGL5YOR081C 2250 nt7.83□□□□□ -1.16
TDA11P38854 RSC9YML127W 1746 nt7.83□□□□□ -1.16
TDA11P38854 YCP4YCR004C 744 nt7.83□□□□□ -1.16
TDA11P38854 YNL040WYNL040W 1371 nt7.83□□□□□ -1.16
TDA11P38854 PTC6YCR079W 1329 nt7.82□□□□□ -1.16
TDA11P38854 ENO2YHR174W 1314 nt7.82□□□□□ -1.16
TDA11P38854 YLR030WYLR030W 792 nt7.82□□□□□ -1.16
TDA11P38854 SRP54YPR088C 1626 nt7.81□□□□□ -1.16
TDA11P38854 ABZ2YMR289W 1125 nt7.81□□□□□ -1.16
TDA11P38854 YKR018CYKR018C 2178 nt7.81□□□□□ -1.16
TDA11P38854 YER137CYER137C 447 nt7.79□□□□□ -1.16
TDA11P38854 NAS2YIL007C 663 nt7.79□□□□□ -1.16
TDA11P38854 KTR4YBR199W 1395 nt7.79□□□□□ -1.16
TDA11P38854 GCD11YER025W 1584 nt7.79□□□□□ -1.16
TDA11P38854 tA(AGC)DtA(AGC)D 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)FtA(AGC)F 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)GtA(AGC)G 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)HtA(AGC)H 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)JtA(AGC)J 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)K1tA(AGC)K1 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)K2tA(AGC)K2 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)LtA(AGC)L 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)M1tA(AGC)M1 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)M2tA(AGC)M2 73 nt7.78□□□□□ -1.16
TDA11P38854 tA(AGC)PtA(AGC)P 73 nt7.78□□□□□ -1.16
TDA11P38854 HXT13YEL069C 1695 nt7.78□□□□□ -1.16
TDA11P38854 SWM1YDR260C 513 nt7.77□□□□□ -1.17
TDA11P38854 YDR510C-AYDR510C-A 117 nt7.77□□□□□ -1.17
TDA11P38854 TDA4YJR116W 840 nt7.77□□□□□ -1.17
TDA11P38854 IPL1YPL209C 1104 nt7.77□□□□□ -1.17
TDA11P38854 BNA3YJL060W 1335 nt7.77□□□□□ -1.17
TDA11P38854 RPL12BYDR418W 498 nt7.76□□□□□ -1.17
TDA11P38854 YJR149WYJR149W 1215 nt7.76□□□□□ -1.17
TDA11P38854 HEM14YER014W 1620 nt7.76□□□□□ -1.17
TDA11P38854 THP3YPR045C 1413 nt7.76□□□□□ -1.17
TDA11P38854 MAS1YLR163C 1389 nt7.75□□□□□ -1.17
TDA11P38854 YBL111CYBL111C 2004 nt7.75□□□□□ -1.17
TDA11P38854 SOD2YHR008C 702 nt7.75□□□□□ -1.17
TDA11P38854 PDC5YLR134W 1692 nt7.75□□□□□ -1.17
TDA11P38854 DIP5YPL265W 1827 nt7.75□□□□□ -1.17
TDA11P38854 BUB2YMR055C 921 nt7.74□□□□□ -1.17
TDA11P38854 CCR4YAL021C 2514 nt7.74□□□□□ -1.17
TDA11P38854 FCP1YMR277W 2199 nt7.73□□□□□ -1.17
TDA11P38854 FSH2YMR222C 672 nt7.73□□□□□ -1.17
TDA11P38854 LEU2YCL018W 1095 nt7.73□□□□□ -1.17
TDA11P38854 PRB1YEL060C 1908 nt7.73□□□□□ -1.17
TDA11P38854 YLR173WYLR173W 1827 nt7.73□□□□□ -1.17
TDA11P38854 RUP1YOR138C 2016 nt7.73□□□□□ -1.17
TDA11P38854 NAM8YHR086W 1572 nt7.72□□□□□ -1.17
TDA11P38854 TPC1YGR096W 945 nt7.72□□□□□ -1.17
TDA11P38854 CDC13YDL220C 2775 nt7.72□□□□□ -1.17
TDA11P38854 SEC24YIL109C 2781 nt7.71□□□□□ -1.17
TDA11P38854 FLX1YIL134W 936 nt7.71□□□□□ -1.18
TDA11P38854 MAL31YBR298C 1845 nt7.71□□□□□ -1.18
TDA11P38854 PEX28YHR150W 1740 nt7.7□□□□□ -1.18
TDA11P38854 YCR025CYCR025C 411 nt7.7□□□□□ -1.18
TDA11P38854 CKB1YGL019W 837 nt7.7□□□□□ -1.18
TDA11P38854 YIR035CYIR035C 765 nt7.7□□□□□ -1.18
TDA11P38854 MSB3YNL293W 1902 nt7.7□□□□□ -1.18
TDA11P38854 TPO1YLL028W 1761 nt7.69□□□□□ -1.18
TDA11P38854 TOD6YBL054W 1578 nt7.69□□□□□ -1.18
TDA11P38854 YER152W-AYER152W-A 567 nt7.69□□□□□ -1.18
TDA11P38854 REX2YLR059C 810 nt7.69□□□□□ -1.18
TDA11P38854 MRP7YNL005C 1116 nt7.69□□□□□ -1.18
TDA11P38854 AVL9YLR114C 2295 nt7.69□□□□□ -1.18
TDA11P38854 KRE1YNL322C 942 nt7.68□□□□□ -1.18
TDA11P38854 PHB2YGR231C 933 nt7.67□□□□□ -1.18
TDA11P38854 YPT11YNL304W 1254 nt7.67□□□□□ -1.18
TDA11P38854 GNA1YFL017C 480 nt7.66□□□□□ -1.18
TDA11P38854 RMD8YFR048W 1989 nt7.65□□□□□ -1.18
TDA11P38854 APT1YML022W 564 nt7.65□□□□□ -1.18
TDA11P38854 EHT1YBR177C 1356 nt7.64□□□□□ -1.19
TDA11P38854 ALG7YBR243C 1347 nt7.64□□□□□ -1.19
TDA11P38854 ARO3YDR035W 1113 nt7.64□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 49.3 ms