Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 THI3YDL080C 1830 nt9.79□□□□□ -0.84
SSF1P38789 LSP1YPL004C 1026 nt9.78□□□□□ -0.84
SSF1P38789 YMR316C-BYMR316C-B 309 nt9.77□□□□□ -0.85
SSF1P38789 POP2YNR052C 1302 nt9.77□□□□□ -0.85
SSF1P38789 INH1YDL181W 258 nt9.76□□□□□ -0.85
SSF1P38789 YMR166CYMR166C 1107 nt9.76□□□□□ -0.85
SSF1P38789 YER152W-AYER152W-A 567 nt9.74□□□□□ -0.85
SSF1P38789 CHS7YHR142W 951 nt9.73□□□□□ -0.85
SSF1P38789 YBL095WYBL095W 813 nt9.73□□□□□ -0.85
SSF1P38789 YMC2YBR104W 990 nt9.73□□□□□ -0.85
SSF1P38789 HXT10YFL011W 1641 nt9.72□□□□□ -0.85
SSF1P38789 YJL160CYJL160C 864 nt9.72□□□□□ -0.85
SSF1P38789 CYT1YOR065W 930 nt9.72□□□□□ -0.85
SSF1P38789 OLA1YBR025C 1185 nt9.72□□□□□ -0.85
SSF1P38789 PSD1YNL169C 1503 nt9.71□□□□□ -0.86
SSF1P38789 tE(CUC)DtE(CUC)D 72 nt9.7□□□□□ -0.86
SSF1P38789 tE(CUC)ItE(CUC)I 72 nt9.7□□□□□ -0.86
SSF1P38789 EMC3YKL207W 762 nt9.7□□□□□ -0.86
SSF1P38789 YMR210WYMR210W 1350 nt9.7□□□□□ -0.86
SSF1P38789 YPL277CYPL277C 1464 nt9.7□□□□□ -0.86
SSF1P38789 CAK1YFL029C 1107 nt9.69□□□□□ -0.86
SSF1P38789 HMG2YLR450W 3138 nt9.68□□□□□ -0.86
SSF1P38789 OCH1YGL038C 1443 nt9.68□□□□□ -0.86
SSF1P38789 HEL2YDR266C 1920 nt9.68□□□□□ -0.86
SSF1P38789 RRT14YIL127C 621 nt9.67□□□□□ -0.86
SSF1P38789 YJR149WYJR149W 1215 nt9.67□□□□□ -0.86
SSF1P38789 MRS4YKR052C 915 nt9.67□□□□□ -0.86
SSF1P38789 MET22YOL064C 1074 nt9.67□□□□□ -0.86
SSF1P38789 PET18YCR020C 648 nt9.66□□□□□ -0.86
SSF1P38789 YIR035CYIR035C 765 nt9.66□□□□□ -0.86
SSF1P38789 PZF1YPR186C 1290 nt9.66□□□□□ -0.86
SSF1P38789 YJL009WYJL009W 327 nt9.65□□□□□ -0.86
SSF1P38789 BUD20YLR074C 501 nt9.65□□□□□ -0.86
SSF1P38789 TMS1YDR105C 1422 nt9.65□□□□□ -0.87
SSF1P38789 AGP3YFL055W 1677 nt9.64□□□□□ -0.87
SSF1P38789 GRH1YDR517W 1119 nt9.64□□□□□ -0.87
SSF1P38789 COX16YJL003W 357 nt9.64□□□□□ -0.87
SSF1P38789 NPP2YEL016C 1482 nt9.64□□□□□ -0.87
SSF1P38789 ECM27YJR106W 2178 nt9.64□□□□□ -0.87
SSF1P38789 YLR173WYLR173W 1827 nt9.63□□□□□ -0.87
SSF1P38789 YHR218WYHR218W 1812 nt9.62□□□□□ -0.87
SSF1P38789 TPO4YOR273C 1980 nt9.62□□□□□ -0.87
SSF1P38789 BUR6YER159C 429 nt9.61□□□□□ -0.87
SSF1P38789 MFT1YML062C 1179 nt9.61□□□□□ -0.87
SSF1P38789 BUB2YMR055C 921 nt9.61□□□□□ -0.87
SSF1P38789 URA8YJR103W 1737 nt9.61□□□□□ -0.87
SSF1P38789 TPN1YGL186C 1740 nt9.6□□□□□ -0.87
SSF1P38789 MAK32YCR019W 1092 nt9.6□□□□□ -0.87
SSF1P38789 PDC6YGR087C 1692 nt9.6□□□□□ -0.87
SSF1P38789 YPL071CYPL071C 471 nt9.59□□□□□ -0.87
SSF1P38789 SNU66YOR308C 1764 nt9.59□□□□□ -0.87
SSF1P38789 AAT1YKL106W 1356 nt9.59□□□□□ -0.87
SSF1P38789 YPR084WYPR084W 1371 nt9.59□□□□□ -0.87
SSF1P38789 YPT31YER031C 672 nt9.58□□□□□ -0.88
SSF1P38789 RNA170RNA170 169 nt9.58□□□□□ -0.88
SSF1P38789 YKR023WYKR023W 1593 nt9.58□□□□□ -0.88
SSF1P38789 HRA1HRA1 564 nt9.57□□□□□ -0.88
SSF1P38789 SRN2YLR119W 642 nt9.57□□□□□ -0.88
SSF1P38789 YMR206WYMR206W 942 nt9.57□□□□□ -0.88
SSF1P38789 RPS6AYPL090C 711 nt9.56□□□□□ -0.88
SSF1P38789 RHO1YPR165W 630 nt9.56□□□□□ -0.88
SSF1P38789 RPS6BYBR181C 711 nt9.56□□□□□ -0.88
SSF1P38789 UTR5YEL035C 501 nt9.55□□□□□ -0.88
SSF1P38789 YOR343CYOR343C 327 nt9.55□□□□□ -0.88
SSF1P38789 YRF1-2YER190W 5046 nt9.55□□□□□ -0.88
SSF1P38789 MRP1YDR347W 966 nt9.54□□□□□ -0.88
SSF1P38789 YER156CYER156C 1017 nt9.54□□□□□ -0.88
SSF1P38789 BXI1YNL305C 894 nt9.54□□□□□ -0.88
SSF1P38789 NSG2YNL156C 900 nt9.53□□□□□ -0.88
SSF1P38789 THI73YLR004C 1572 nt9.53□□□□□ -0.88
SSF1P38789 MTO1YGL236C 2010 nt9.52□□□□□ -0.89
SSF1P38789 AST1YBL069W 1290 nt9.52□□□□□ -0.89
SSF1P38789 ADA2YDR448W 1305 nt9.52□□□□□ -0.89
SSF1P38789 NPL6YMR091C 1308 nt9.52□□□□□ -0.89
SSF1P38789 YBR056WYBR056W 1506 nt9.51□□□□□ -0.89
SSF1P38789 snR86snR86 1004 nt9.51□□□□□ -0.89
SSF1P38789 GDH1YOR375C 1365 nt9.5□□□□□ -0.89
SSF1P38789 MEP1YGR121C 1479 nt9.5□□□□□ -0.89
SSF1P38789 EHD3YDR036C 1503 nt9.5□□□□□ -0.89
SSF1P38789 HOS2YGL194C 1359 nt9.49□□□□□ -0.89
SSF1P38789 UBP13YBL067C 2244 nt9.48□□□□□ -0.89
SSF1P38789 YAL016C-AYAL016C-A 315 nt9.48□□□□□ -0.89
SSF1P38789 YCR049CYCR049C 447 nt9.47□□□□□ -0.89
SSF1P38789 YIR018C-AYIR018C-A 138 nt9.47□□□□□ -0.89
SSF1P38789 PUP3YER094C 618 nt9.46□□□□□ -0.9
SSF1P38789 TAD2YJL035C 753 nt9.46□□□□□ -0.9
SSF1P38789 ELP4YPL101W 1371 nt9.45□□□□□ -0.9
SSF1P38789 RPL12BYDR418W 498 nt9.44□□□□□ -0.9
SSF1P38789 TDH1YJL052W 999 nt9.44□□□□□ -0.9
SSF1P38789 YJL045WYJL045W 1905 nt9.43□□□□□ -0.9
SSF1P38789 SHC1YER096W 1539 nt9.43□□□□□ -0.9
SSF1P38789 ADE2YOR128C 1716 nt9.42□□□□□ -0.9
SSF1P38789 TRP2YER090W 1524 nt9.42□□□□□ -0.9
SSF1P38789 ATP2YJR121W 1536 nt9.42□□□□□ -0.9
SSF1P38789 tL(UAA)B1tL(UAA)B1 84 nt9.42□□□□□ -0.9
SSF1P38789 tL(UAA)B2tL(UAA)B2 84 nt9.42□□□□□ -0.9
SSF1P38789 tL(UAA)DtL(UAA)D 84 nt9.42□□□□□ -0.9
SSF1P38789 SUP51tL(UAA)J 84 nt9.42□□□□□ -0.9
SSF1P38789 tL(UAA)KtL(UAA)K 84 nt9.42□□□□□ -0.9
SSF1P38789 tL(UAA)LtL(UAA)L 84 nt9.42□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 62.6 ms