Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YBR056WYBR056W 1506 nt7.12□□□□□ -1.27
SSH1P38353 ENO1YGR254W 1314 nt7.12□□□□□ -1.27
SSH1P38353 YFR020WYFR020W 699 nt7.12□□□□□ -1.27
SSH1P38353 FTH1YBR207W 1398 nt7.1□□□□□ -1.27
SSH1P38353 DUS3YLR401C 2007 nt7.1□□□□□ -1.27
SSH1P38353 YJR149WYJR149W 1215 nt7.1□□□□□ -1.27
SSH1P38353 BUB2YMR055C 921 nt7.1□□□□□ -1.27
SSH1P38353 HIS3YOR202W 663 nt7.1□□□□□ -1.27
SSH1P38353 YBR232CYBR232C 360 nt7.1□□□□□ -1.27
SSH1P38353 BAP3YDR046C 1815 nt7.09□□□□□ -1.27
SSH1P38353 MOB1YIL106W 945 nt7.09□□□□□ -1.27
SSH1P38353 ABP1YCR088W 1779 nt7.09□□□□□ -1.27
SSH1P38353 CMK2YOL016C 1344 nt7.08□□□□□ -1.28
SSH1P38353 tS(GCU)LtS(GCU)L 80 nt7.08□□□□□ -1.28
SSH1P38353 FLX1YIL134W 936 nt7.08□□□□□ -1.28
SSH1P38353 snR4snR4 186 nt7.08□□□□□ -1.28
SSH1P38353 SMC5YOL034W 3282 nt7.08□□□□□ -1.28
SSH1P38353 MSB3YNL293W 1902 nt7.07□□□□□ -1.28
SSH1P38353 tA(AGC)DtA(AGC)D 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)FtA(AGC)F 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)GtA(AGC)G 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)HtA(AGC)H 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)JtA(AGC)J 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)K1tA(AGC)K1 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)K2tA(AGC)K2 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)LtA(AGC)L 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)M1tA(AGC)M1 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)M2tA(AGC)M2 73 nt7.06□□□□□ -1.28
SSH1P38353 tA(AGC)PtA(AGC)P 73 nt7.06□□□□□ -1.28
SSH1P38353 MEP1YGR121C 1479 nt7.05□□□□□ -1.28
SSH1P38353 DIA4YHR011W 1341 nt7.05□□□□□ -1.28
SSH1P38353 YLR460CYLR460C 1131 nt7.05□□□□□ -1.28
SSH1P38353 IPL1YPL209C 1104 nt7.05□□□□□ -1.28
SSH1P38353 SRP102YKL154W 735 nt7.04□□□□□ -1.28
SSH1P38353 POP2YNR052C 1302 nt7.03□□□□□ -1.28
SSH1P38353 HEL1YKR017C 1656 nt7.03□□□□□ -1.28
SSH1P38353 CYC3YAL039C 810 nt7.03□□□□□ -1.28
SSH1P38353 AIM34YMR003W 597 nt7.03□□□□□ -1.28
SSH1P38353 ADE16YLR028C 1776 nt7.03□□□□□ -1.28
SSH1P38353 PUS7YOR243C 2031 nt7.02□□□□□ -1.29
SSH1P38353 TOP3YLR234W 1971 nt7.02□□□□□ -1.29
SSH1P38353 YCR061WYCR061W 1896 nt7.01□□□□□ -1.29
SSH1P38353 HXT13YEL069C 1695 nt7.01□□□□□ -1.29
SSH1P38353 BUD31YCR063W 474 nt7.01□□□□□ -1.29
SSH1P38353 CHS7YHR142W 951 nt7.01□□□□□ -1.29
SSH1P38353 YLR280CYLR280C 351 nt7.01□□□□□ -1.29
SSH1P38353 CKI1YLR133W 1749 nt7.01□□□□□ -1.29
SSH1P38353 NDE2YDL085W 1638 nt7.01□□□□□ -1.29
SSH1P38353 TIF3YPR163C 1311 nt7.01□□□□□ -1.29
SSH1P38353 YNL140CYNL140C 570 nt7□□□□□ -1.29
SSH1P38353 GLY1YEL046C 1164 nt6.99□□□□□ -1.29
SSH1P38353 RNA170RNA170 169 nt6.99□□□□□ -1.29
SSH1P38353 OLA1YBR025C 1185 nt6.99□□□□□ -1.29
SSH1P38353 INO1YJL153C 1602 nt6.98□□□□□ -1.29
SSH1P38353 TDA4YJR116W 840 nt6.98□□□□□ -1.29
SSH1P38353 MET22YOL064C 1074 nt6.98□□□□□ -1.29
SSH1P38353 YNL040WYNL040W 1371 nt6.97□□□□□ -1.29
SSH1P38353 EHT1YBR177C 1356 nt6.97□□□□□ -1.29
SSH1P38353 ERO1YML130C 1692 nt6.97□□□□□ -1.29
SSH1P38353 TGL5YOR081C 2250 nt6.97□□□□□ -1.29
SSH1P38353 ADH6YMR318C 1083 nt6.97□□□□□ -1.29
SSH1P38353 YRF1-1YDR545W 5391 nt6.97□□□□□ -1.29
SSH1P38353 YRF1-5YLR467W 5391 nt6.97□□□□□ -1.29
SSH1P38353 YRF1-8YOR396W 5391 nt6.97□□□□□ -1.29
SSH1P38353 LRO1YNR008W 1986 nt6.97□□□□□ -1.29
SSH1P38353 INM1YHR046C 888 nt6.96□□□□□ -1.3
SSH1P38353 CRN1YLR429W 1956 nt6.96□□□□□ -1.3
SSH1P38353 PDC6YGR087C 1692 nt6.96□□□□□ -1.3
SSH1P38353 MRN1YPL184C 1839 nt6.95□□□□□ -1.3
SSH1P38353 DIP5YPL265W 1827 nt6.95□□□□□ -1.3
SSH1P38353 CHA1YCL064C 1083 nt6.95□□□□□ -1.3
SSH1P38353 YCR025CYCR025C 411 nt6.95□□□□□ -1.3
SSH1P38353 ATO2YNR002C 849 nt6.95□□□□□ -1.3
SSH1P38353 RCF1YML030W 480 nt6.94□□□□□ -1.3
SSH1P38353 OCH1YGL038C 1443 nt6.93□□□□□ -1.3
SSH1P38353 ITR1YDR497C 1755 nt6.93□□□□□ -1.3
SSH1P38353 MAS2YHR024C 1449 nt6.93□□□□□ -1.3
SSH1P38353 SER2YGR208W 930 nt6.92□□□□□ -1.3
SSH1P38353 YMR166CYMR166C 1107 nt6.92□□□□□ -1.3
SSH1P38353 MDH2YOL126C 1134 nt6.92□□□□□ -1.3
SSH1P38353 CDC13YDL220C 2775 nt6.92□□□□□ -1.3
SSH1P38353 WSC3YOL105C 1671 nt6.92□□□□□ -1.3
SSH1P38353 YGR137WYGR137W 375 nt6.91□□□□□ -1.3
SSH1P38353 SEN2YLR105C 1134 nt6.91□□□□□ -1.3
SSH1P38353 PFS2YNL317W 1398 nt6.91□□□□□ -1.3
SSH1P38353 HTS1YPR033C 1641 nt6.9□□□□□ -1.3
SSH1P38353 CAK1YFL029C 1107 nt6.9□□□□□ -1.3
SSH1P38353 YJL064WYJL064W 396 nt6.9□□□□□ -1.3
SSH1P38353 ATP10YLR393W 840 nt6.9□□□□□ -1.3
SSH1P38353 RHO1YPR165W 630 nt6.9□□□□□ -1.3
SSH1P38353 WSC4YHL028W 1818 nt6.9□□□□□ -1.31
SSH1P38353 PUP3YER094C 618 nt6.89□□□□□ -1.31
SSH1P38353 YGR210CYGR210C 1236 nt6.89□□□□□ -1.31
SSH1P38353 KTR4YBR199W 1395 nt6.88□□□□□ -1.31
SSH1P38353 RPL2AYFR031C-A 765 nt6.88□□□□□ -1.31
SSH1P38353 MRP7YNL005C 1116 nt6.88□□□□□ -1.31
SSH1P38353 HSV2YGR223C 1347 nt6.87□□□□□ -1.31
SSH1P38353 PAU19YMR325W 375 nt6.87□□□□□ -1.31
SSH1P38353 PMT7YDR307W 1989 nt6.86□□□□□ -1.31
SSH1P38353 ALG7YBR243C 1347 nt6.86□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 48.6 ms