Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RetP35546 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.98■■□□□ 1.11
RetP35546 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RetP35546 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RetP35546 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.96■■□□□ 1.11
RetP35546 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
RetP35546 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RetP35546 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RetP35546 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RetP35546 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RetP35546 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RetP35546 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RetP35546 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RetP35546 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RetP35546 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RetP35546 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RetP35546 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RetP35546 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RetP35546 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RetP35546 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.92■■□□□ 1.1
RetP35546 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RetP35546 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RetP35546 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RetP35546 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RetP35546 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.9■■□□□ 1.1
RetP35546 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.9■■□□□ 1.1
RetP35546 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RetP35546 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RetP35546 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
RetP35546 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RetP35546 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RetP35546 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RetP35546 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RetP35546 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RetP35546 Gm11175-201ENSMUST00000116172 543 ntBASIC21.88■■□□□ 1.09
RetP35546 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RetP35546 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RetP35546 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RetP35546 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RetP35546 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RetP35546 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RetP35546 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.86■■□□□ 1.09
RetP35546 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RetP35546 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RetP35546 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RetP35546 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.85■■□□□ 1.09
RetP35546 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RetP35546 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RetP35546 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.84■■□□□ 1.09
RetP35546 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RetP35546 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RetP35546 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RetP35546 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RetP35546 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RetP35546 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RetP35546 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RetP35546 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RetP35546 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RetP35546 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RetP35546 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RetP35546 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RetP35546 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RetP35546 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.8■■□□□ 1.08
RetP35546 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RetP35546 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.8■■□□□ 1.08
RetP35546 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.8■■□□□ 1.08
RetP35546 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RetP35546 Cap2-205ENSMUST00000225824 1634 ntBASIC21.8■■□□□ 1.08
RetP35546 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.8■■□□□ 1.08
RetP35546 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RetP35546 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RetP35546 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.79■■□□□ 1.08
RetP35546 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RetP35546 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RetP35546 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RetP35546 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RetP35546 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RetP35546 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RetP35546 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RetP35546 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RetP35546 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RetP35546 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.77■■□□□ 1.08
RetP35546 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RetP35546 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RetP35546 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RetP35546 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RetP35546 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RetP35546 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RetP35546 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.75■■□□□ 1.07
RetP35546 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
RetP35546 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RetP35546 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RetP35546 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RetP35546 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RetP35546 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RetP35546 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RetP35546 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RetP35546 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
RetP35546 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.72■■□□□ 1.07
RetP35546 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms