Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeastyeast

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC53P25441 RRT14YIL127C 621 nt8.77□□□□□ -1.01
RPC53P25441 YLR072WYLR072W 2082 nt8.77□□□□□ -1.01
RPC53P25441 YMR210WYMR210W 1350 nt8.76□□□□□ -1.01
RPC53P25441 YBR056WYBR056W 1506 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)BtD(GUC)B 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)DtD(GUC)D 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)G1tD(GUC)G1 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)G2tD(GUC)G2 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)I1tD(GUC)I1 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)I2tD(GUC)I2 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)J1tD(GUC)J1 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)J2tD(GUC)J2 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)J3tD(GUC)J3 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)J4tD(GUC)J4 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)KtD(GUC)K 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)L1tD(GUC)L1 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)L2tD(GUC)L2 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)MtD(GUC)M 72 nt8.76□□□□□ -1.01
RPC53P25441 tD(GUC)OtD(GUC)O 72 nt8.76□□□□□ -1.01
RPC53P25441 GRH1YDR517W 1119 nt8.75□□□□□ -1.01
RPC53P25441 MET22YOL064C 1074 nt8.75□□□□□ -1.01
RPC53P25441 PET18YCR020C 648 nt8.74□□□□□ -1.01
RPC53P25441 BUD20YLR074C 501 nt8.74□□□□□ -1.01
RPC53P25441 PDC6YGR087C 1692 nt8.73□□□□□ -1.01
RPC53P25441 MEP1YGR121C 1479 nt8.73□□□□□ -1.01
RPC53P25441 YRF1-3YGR296W 5580 nt8.73□□□□□ -1.01
RPC53P25441 YRF1-6YNL339C 5580 nt8.73□□□□□ -1.01
RPC53P25441 YRF1-7YPL283C 5580 nt8.73□□□□□ -1.01
RPC53P25441 SRM1YGL097W 1449 nt8.72□□□□□ -1.01
RPC53P25441 GNP1YDR508C 1992 nt8.72□□□□□ -1.01
RPC53P25441 MFT1YML062C 1179 nt8.72□□□□□ -1.01
RPC53P25441 PAU21YOR394W 495 nt8.72□□□□□ -1.01
RPC53P25441 PAU22YPL282C 495 nt8.72□□□□□ -1.01
RPC53P25441 RNA170RNA170 169 nt8.71□□□□□ -1.02
RPC53P25441 MIM1YOL026C 342 nt8.71□□□□□ -1.02
RPC53P25441 YOR072WYOR072W 315 nt8.71□□□□□ -1.02
RPC53P25441 YER156CYER156C 1017 nt8.7□□□□□ -1.02
RPC53P25441 HRA1HRA1 564 nt8.7□□□□□ -1.02
RPC53P25441 YOR343CYOR343C 327 nt8.7□□□□□ -1.02
RPC53P25441 YPR084WYPR084W 1371 nt8.7□□□□□ -1.02
RPC53P25441 LEA1YPL213W 717 nt8.69□□□□□ -1.02
RPC53P25441 MRP1YDR347W 966 nt8.68□□□□□ -1.02
RPC53P25441 YJR154WYJR154W 1041 nt8.68□□□□□ -1.02
RPC53P25441 YIL177CYIL177C 5277 nt8.67□□□□□ -1.02
RPC53P25441 HBS1YKR084C 1836 nt8.67□□□□□ -1.02
RPC53P25441 HIS3YOR202W 663 nt8.67□□□□□ -1.02
RPC53P25441 YPT31YER031C 672 nt8.66□□□□□ -1.02
RPC53P25441 ABP1YCR088W 1779 nt8.66□□□□□ -1.02
RPC53P25441 ADA2YDR448W 1305 nt8.65□□□□□ -1.02
RPC53P25441 YMR206WYMR206W 942 nt8.65□□□□□ -1.02
RPC53P25441 ORT1YOR130C 879 nt8.65□□□□□ -1.02
RPC53P25441 RPS6AYPL090C 711 nt8.65□□□□□ -1.02
RPC53P25441 RHO1YPR165W 630 nt8.65□□□□□ -1.02
RPC53P25441 RPS6BYBR181C 711 nt8.65□□□□□ -1.02
RPC53P25441 BXI1YNL305C 894 nt8.64□□□□□ -1.03
RPC53P25441 GDH1YOR375C 1365 nt8.63□□□□□ -1.03
RPC53P25441 UTR5YEL035C 501 nt8.63□□□□□ -1.03
RPC53P25441 FTH1YBR207W 1398 nt8.62□□□□□ -1.03
RPC53P25441 RPL12BYDR418W 498 nt8.62□□□□□ -1.03
RPC53P25441 EHT1YBR177C 1356 nt8.61□□□□□ -1.03
RPC53P25441 LRO1YNR008W 1986 nt8.61□□□□□ -1.03
RPC53P25441 TAD2YJL035C 753 nt8.61□□□□□ -1.03
RPC53P25441 YAL016C-AYAL016C-A 315 nt8.61□□□□□ -1.03
RPC53P25441 INO1YJL153C 1602 nt8.61□□□□□ -1.03
RPC53P25441 DUR3YHL016C 2208 nt8.6□□□□□ -1.03
RPC53P25441 MEX67YPL169C 1800 nt8.6□□□□□ -1.03
RPC53P25441 BUD31YCR063W 474 nt8.6□□□□□ -1.03
RPC53P25441 PUP3YER094C 618 nt8.6□□□□□ -1.03
RPC53P25441 NDE2YDL085W 1638 nt8.6□□□□□ -1.03
RPC53P25441 ELP4YPL101W 1371 nt8.6□□□□□ -1.03
RPC53P25441 THI73YLR004C 1572 nt8.59□□□□□ -1.03
RPC53P25441 FRA1YLL029W 2250 nt8.57□□□□□ -1.04
RPC53P25441 TDH1YJL052W 999 nt8.56□□□□□ -1.04
RPC53P25441 RCF1YML030W 480 nt8.56□□□□□ -1.04
RPC53P25441 ATP2YJR121W 1536 nt8.55□□□□□ -1.04
RPC53P25441 DIP5YPL265W 1827 nt8.55□□□□□ -1.04
RPC53P25441 tL(UAA)B1tL(UAA)B1 84 nt8.55□□□□□ -1.04
RPC53P25441 tL(UAA)B2tL(UAA)B2 84 nt8.55□□□□□ -1.04
RPC53P25441 tL(UAA)DtL(UAA)D 84 nt8.55□□□□□ -1.04
RPC53P25441 SUP51tL(UAA)J 84 nt8.55□□□□□ -1.04
RPC53P25441 tL(UAA)KtL(UAA)K 84 nt8.55□□□□□ -1.04
RPC53P25441 tL(UAA)LtL(UAA)L 84 nt8.55□□□□□ -1.04
RPC53P25441 tL(UAA)NtL(UAA)N 84 nt8.55□□□□□ -1.04
RPC53P25441 TDA4YJR116W 840 nt8.55□□□□□ -1.04
RPC53P25441 YNL140CYNL140C 570 nt8.55□□□□□ -1.04
RPC53P25441 snR4snR4 186 nt8.55□□□□□ -1.04
RPC53P25441 TIF3YPR163C 1311 nt8.54□□□□□ -1.04
RPC53P25441 SHC1YER096W 1539 nt8.54□□□□□ -1.04
RPC53P25441 TGL5YOR081C 2250 nt8.54□□□□□ -1.04
RPC53P25441 GLY1YEL046C 1164 nt8.54□□□□□ -1.04
RPC53P25441 PMU1YKL128C 888 nt8.54□□□□□ -1.04
RPC53P25441 MRN1YPL184C 1839 nt8.52□□□□□ -1.04
RPC53P25441 YHL030W-AYHL030W-A 462 nt8.52□□□□□ -1.05
RPC53P25441 INM1YHR046C 888 nt8.52□□□□□ -1.05
RPC53P25441 WSC3YOL105C 1671 nt8.52□□□□□ -1.05
RPC53P25441 YGR137WYGR137W 375 nt8.51□□□□□ -1.05
RPC53P25441 PRE10YOR362C 867 nt8.51□□□□□ -1.05
RPC53P25441 HXT8YJL214W 1710 nt8.51□□□□□ -1.05
RPC53P25441 TOM71YHR117W 1920 nt8.5□□□□□ -1.05
RPC53P25441 ADE1YAR015W 921 nt8.5□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms