Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
A0A1L1SQF0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
A0A1L1SQF0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
A0A1L1SQF0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
A0A1L1SQF0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
A0A1L1SQF0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.47■■□□□ 1.83
A0A1L1SQF0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
A0A1L1SQF0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
A0A1L1SQF0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.44■■□□□ 1.82
A0A1L1SQF0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
A0A1L1SQF0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
A0A1L1SQF0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
A0A1L1SQF0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
A0A1L1SQF0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
A0A1L1SQF0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
A0A1L1SQF0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
A0A1L1SQF0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.42■■□□□ 1.82
A0A1L1SQF0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
A0A1L1SQF0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
A0A1L1SQF0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
A0A1L1SQF0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
A0A1L1SQF0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
A0A1L1SQF0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
A0A1L1SQF0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
A0A1L1SQF0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
A0A1L1SQF0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
A0A1L1SQF0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
A0A1L1SQF0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.4■■□□□ 1.82
A0A1L1SQF0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.39■■□□□ 1.82
A0A1L1SQF0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
A0A1L1SQF0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.38■■□□□ 1.81
A0A1L1SQF0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
A0A1L1SQF0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
A0A1L1SQF0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
A0A1L1SQF0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
A0A1L1SQF0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.35■■□□□ 1.81
A0A1L1SQF0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
A0A1L1SQF0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
A0A1L1SQF0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
A0A1L1SQF0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.32■■□□□ 1.8
A0A1L1SQF0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
A0A1L1SQF0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
A0A1L1SQF0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
A0A1L1SQF0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
A0A1L1SQF0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
A0A1L1SQF0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
A0A1L1SQF0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
A0A1L1SQF0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
A0A1L1SQF0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
A0A1L1SQF0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
A0A1L1SQF0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.29■■□□□ 1.8
A0A1L1SQF0 Gm45855-201ENSMUST00000212546 880 ntBASIC26.29■■□□□ 1.8
A0A1L1SQF0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
A0A1L1SQF0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.27■■□□□ 1.8
A0A1L1SQF0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A0A1L1SQF0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
A0A1L1SQF0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A0A1L1SQF0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
A0A1L1SQF0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A0A1L1SQF0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
A0A1L1SQF0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
A0A1L1SQF0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
A0A1L1SQF0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
A0A1L1SQF0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
A0A1L1SQF0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
A0A1L1SQF0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
A0A1L1SQF0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
A0A1L1SQF0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
A0A1L1SQF0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
A0A1L1SQF0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.24■■□□□ 1.79
A0A1L1SQF0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
A0A1L1SQF0 Gm30023-201ENSMUST00000197970 889 ntBASIC26.23■■□□□ 1.79
A0A1L1SQF0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
A0A1L1SQF0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
A0A1L1SQF0 Particl-201ENSMUST00000205370 1560 ntBASIC26.21■■□□□ 1.79
A0A1L1SQF0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
A0A1L1SQF0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
A0A1L1SQF0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
A0A1L1SQF0 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.2■■□□□ 1.78
A0A1L1SQF0 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.2■■□□□ 1.78
A0A1L1SQF0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
A0A1L1SQF0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
A0A1L1SQF0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
A0A1L1SQF0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
A0A1L1SQF0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
A0A1L1SQF0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
A0A1L1SQF0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
A0A1L1SQF0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
A0A1L1SQF0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
A0A1L1SQF0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.17■■□□□ 1.78
A0A1L1SQF0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
A0A1L1SQF0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
A0A1L1SQF0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
A0A1L1SQF0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
A0A1L1SQF0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
A0A1L1SQF0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
A0A1L1SQF0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
A0A1L1SQF0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
A0A1L1SQF0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.14■■□□□ 1.78
A0A1L1SQF0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.14■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms