Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.61■□□□□ 0.73
Trbv15A0A0A6YYE3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trbv15A0A0A6YYE3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trbv15A0A0A6YYE3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv15A0A0A6YYE3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv15A0A0A6YYE3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv15A0A0A6YYE3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv15A0A0A6YYE3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Trbv15A0A0A6YYE3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv15A0A0A6YYE3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trbv15A0A0A6YYE3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv15A0A0A6YYE3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv15A0A0A6YYE3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv15A0A0A6YYE3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv15A0A0A6YYE3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trbv15A0A0A6YYE3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv15A0A0A6YYE3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.57■□□□□ 0.72
Trbv15A0A0A6YYE3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv15A0A0A6YYE3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trbv15A0A0A6YYE3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv15A0A0A6YYE3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv15A0A0A6YYE3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv15A0A0A6YYE3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv15A0A0A6YYE3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv15A0A0A6YYE3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trbv15A0A0A6YYE3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv15A0A0A6YYE3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv15A0A0A6YYE3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv15A0A0A6YYE3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv15A0A0A6YYE3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv15A0A0A6YYE3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv15A0A0A6YYE3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv15A0A0A6YYE3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv15A0A0A6YYE3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv15A0A0A6YYE3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv15A0A0A6YYE3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv15A0A0A6YYE3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv15A0A0A6YYE3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.52■□□□□ 0.72
Trbv15A0A0A6YYE3 Gm8109-201ENSMUST00000194076 746 ntBASIC19.52■□□□□ 0.72
Trbv15A0A0A6YYE3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv15A0A0A6YYE3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Trbv15A0A0A6YYE3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv15A0A0A6YYE3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv15A0A0A6YYE3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv15A0A0A6YYE3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv15A0A0A6YYE3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv15A0A0A6YYE3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv15A0A0A6YYE3 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.49■□□□□ 0.71
Trbv15A0A0A6YYE3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv15A0A0A6YYE3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv15A0A0A6YYE3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv15A0A0A6YYE3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv15A0A0A6YYE3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv15A0A0A6YYE3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.46■□□□□ 0.71
Trbv15A0A0A6YYE3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv15A0A0A6YYE3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv15A0A0A6YYE3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv15A0A0A6YYE3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv15A0A0A6YYE3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv15A0A0A6YYE3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.45■□□□□ 0.7
Trbv15A0A0A6YYE3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv15A0A0A6YYE3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.44■□□□□ 0.7
Trbv15A0A0A6YYE3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv15A0A0A6YYE3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trbv15A0A0A6YYE3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv15A0A0A6YYE3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv15A0A0A6YYE3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Trbv15A0A0A6YYE3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv15A0A0A6YYE3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv15A0A0A6YYE3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv15A0A0A6YYE3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv15A0A0A6YYE3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv15A0A0A6YYE3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv15A0A0A6YYE3 Gm16148-201ENSMUST00000119653 893 ntBASIC19.42■□□□□ 0.7
Trbv15A0A0A6YYE3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv15A0A0A6YYE3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv15A0A0A6YYE3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trbv15A0A0A6YYE3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv15A0A0A6YYE3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv15A0A0A6YYE3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trbv15A0A0A6YYE3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv15A0A0A6YYE3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trbv15A0A0A6YYE3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv15A0A0A6YYE3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv15A0A0A6YYE3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv15A0A0A6YYE3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv15A0A0A6YYE3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv15A0A0A6YYE3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv15A0A0A6YYE3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv15A0A0A6YYE3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv15A0A0A6YYE3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv15A0A0A6YYE3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv15A0A0A6YYE3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms