Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 AC083880.1-201ENST00000608266 535 ntBASIC20.31■□□□□ 0.84
RFX6Q8HWS3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RFX6Q8HWS3 Z82202.1-201ENST00000623446 1880 ntBASIC20.3■□□□□ 0.84
RFX6Q8HWS3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 PNMA6B-201ENST00000538162 1200 ntBASIC20.3■□□□□ 0.84
RFX6Q8HWS3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 AC060766.5-201ENST00000590539 871 ntBASIC20.3■□□□□ 0.84
RFX6Q8HWS3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX6Q8HWS3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 AC104771.1-201ENST00000603335 964 ntBASIC20.29■□□□□ 0.84
RFX6Q8HWS3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX6Q8HWS3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.28■□□□□ 0.84
RFX6Q8HWS3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 AC133041.1-202ENST00000642053 222 ntBASIC20.28■□□□□ 0.84
RFX6Q8HWS3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX6Q8HWS3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 AL032819.2-201ENST00000624543 2162 ntBASIC20.27■□□□□ 0.84
RFX6Q8HWS3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 AC069152.1-201ENST00000438030 544 ntBASIC20.27■□□□□ 0.84
RFX6Q8HWS3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.27■□□□□ 0.84
RFX6Q8HWS3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX6Q8HWS3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RFX6Q8HWS3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.27■□□□□ 0.83
RFX6Q8HWS3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms