Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn6Q03958 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Gm715-201ENSMUST00000117865 831 ntBASIC16.88■□□□□ 0.29
Pfdn6Q03958 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Il3ra-202ENSMUST00000223589 738 ntBASIC16.88■□□□□ 0.29
Pfdn6Q03958 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pfdn6Q03958 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.87■□□□□ 0.29
Pfdn6Q03958 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.87■□□□□ 0.29
Pfdn6Q03958 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfdn6Q03958 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.86■□□□□ 0.29
Pfdn6Q03958 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Gm27011-201ENSMUST00000182352 972 ntBASIC16.86■□□□□ 0.29
Pfdn6Q03958 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfdn6Q03958 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.85■□□□□ 0.29
Pfdn6Q03958 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms